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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 600.5
Min pTPM: 9.7
Std pTPM: 115.9
Median pTPM: 161.8
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
600.5
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
513.5
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
441.9
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
412.0
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
406.2
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
398.4
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
395.3
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
389.7
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
389.2
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
385.3
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
385.2
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
371.6
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
370.6
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
329.1
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
328.9
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
324.2
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
312.2
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
308.3
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
300.6
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
299.3
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
295.9
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
293.4
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
281.3
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
278.7
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
276.8
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
276.3
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
269.0
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
265.6
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
264.7
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
260.4
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
259.3
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
243.9
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
235.2
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
232.8
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
231.3
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
231.2
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
227.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
227.4
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
220.8
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
214.8
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
214.5
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
212.9
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
210.5
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
199.8
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
199.3
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
197.9
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
193.6
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
192.8
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
181.8
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
175.4
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
174.3
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
172.8
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
172.8
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
172.4
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
172.0
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
167.4
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
164.9
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
164.6
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
164.5
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
164.3
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
163.7
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
161.8
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
159.0
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
158.2
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
155.0
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
154.8
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
153.2
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
153.2
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
152.7
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
152.0
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
151.0
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
147.6
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
147.6
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
137.1
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
136.5
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
135.8
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
128.0
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
127.7
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
123.8
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
122.6
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
122.5
GTEX-15CHQ-0011-R1a-SM-6EU31
60-69 years, male
121.2
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
120.1
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
119.2
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
118.4
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
117.7
GTEX-14PJM-0011-R1a-SM-6EU2Z
50-59 years, female
112.8
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
111.1
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
106.5
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
105.1
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
98.3
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
97.5
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
92.2
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
86.1
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
85.9
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
84.7
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
82.6
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
81.3
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
75.1
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
70.9
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
67.1
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
66.5
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
63.5
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
63.3
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
57.4
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
56.4
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
55.8
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
50.0
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
49.7
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
45.8
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
44.7
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
41.7
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
40.0
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
36.8
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
35.6
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
35.2
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
34.8
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
32.2
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
30.8
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
30.2
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
25.1
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
14.5
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
9.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.