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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 891.5
Min pTPM: 5.2
Std pTPM: 206.3
Median pTPM: 107.0
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
891.5
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
886.9
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
863.7
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
799.5
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
787.2
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
772.9
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
628.7
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
566.0
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
563.1
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
545.0
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
539.0
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
527.7
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
509.6
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
416.6
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
407.9
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
362.5
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
352.6
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
349.5
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
346.1
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
333.1
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
330.1
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
323.6
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
321.1
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
307.8
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
287.4
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
271.2
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
254.5
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
252.0
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
250.3
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
247.7
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
246.9
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
240.4
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
239.6
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
232.9
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
231.6
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
230.2
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
226.0
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
219.8
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
217.0
GTEX-15CHQ-0011-R1a-SM-6EU31
60-69 years, male
202.5
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
202.0
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
190.5
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
175.3
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
175.3
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
173.4
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
173.3
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
163.8
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
162.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
159.2
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
158.8
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
151.9
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
137.9
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
137.3
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
137.1
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
136.3
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
124.9
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
120.7
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
119.4
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
115.5
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
115.4
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
109.4
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
107.0
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
102.2
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
99.4
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
99.0
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
91.7
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
87.5
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
79.4
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
79.1
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
78.8
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
77.6
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
74.4
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
74.1
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
71.8
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
68.3
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
65.8
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
62.8
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
62.4
GTEX-14PJM-0011-R1a-SM-6EU2Z
50-59 years, female
61.7
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
58.8
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
55.4
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
53.5
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
53.2
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
50.3
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
46.5
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
45.9
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
43.7
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
38.7
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
38.6
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
36.6
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
35.1
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
34.5
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
34.2
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
32.7
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
31.1
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
29.6
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
26.0
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
24.5
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
24.3
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
24.1
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
21.7
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
20.2
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
19.8
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
19.8
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
19.6
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
18.6
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
16.7
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
16.3
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
15.5
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
14.4
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
13.3
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
12.8
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
11.3
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
10.5
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
10.5
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
10.3
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
10.2
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
8.9
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
7.9
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
7.6
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
7.6
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
7.6
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
5.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.