We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 514.0
Samples: 160
Max pTPM: 3187.2
Min pTPM: 40.8
Std pTPM: 418.4
Median pTPM: 414.9
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
3187.2
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
2717.7
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
2069.2
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
1936.9
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
1446.8
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
1339.5
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
1325.7
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
1267.8
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
1246.1
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
1230.3
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
1156.4
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
1142.7
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
1069.2
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
895.4
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
864.1
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
863.9
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
852.3
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
850.3
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
792.4
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
790.8
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
734.6
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
726.2
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
725.7
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
711.1
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
710.9
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
702.0
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
701.1
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
683.6
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
677.3
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
665.1
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
650.0
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
642.0
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
638.3
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
631.8
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
631.2
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
617.0
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
614.5
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
613.7
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
607.9
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
603.8
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
600.9
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
598.2
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
596.1
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
585.4
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
571.4
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
558.1
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
550.7
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
548.3
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
537.3
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
536.7
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
536.0
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
515.0
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
514.5
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
513.8
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
513.7
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
513.7
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
513.2
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
507.8
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
498.6
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
498.0
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
497.9
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
487.8
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
487.2
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
484.7
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
483.3
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
480.6
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
477.5
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
474.9
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
472.3
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
465.8
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
463.6
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
461.5
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
446.7
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
435.7
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
434.3
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
424.6
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
423.5
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
419.6
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
419.4
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
417.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
412.3
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
409.2
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
407.1
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
403.7
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
399.5
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
393.5
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
388.3
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
386.8
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
380.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
377.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
376.9
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
366.8
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
366.4
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
365.5
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
364.1
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
361.7
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
361.2
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
360.9
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
358.5
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
345.0
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
344.2
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
343.8
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
339.1
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
334.4
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
332.0
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
330.8
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
330.1
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
328.7
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
325.8
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
323.3
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
322.2
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
312.9
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
312.7
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
303.0
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
302.7
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
301.6
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
297.9
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
292.4
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
291.1
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
291.1
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
288.0
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
284.7
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
279.7
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
278.5
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
277.7
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
271.4
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
264.3
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
263.4
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
262.9
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
253.4
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
252.3
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
251.1
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
247.6
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
247.3
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
247.2
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
222.8
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
212.7
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
211.9
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
208.3
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
208.0
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
207.8
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
204.6
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
203.0
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
194.4
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
192.6
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
175.0
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
173.5
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
167.7
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
154.3
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
153.6
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
149.5
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
149.1
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
144.5
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
142.7
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
119.3
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
117.7
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
103.9
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
88.5
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
87.8
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
40.8
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.