We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 2359.0
Samples: 160
Max pTPM: 8181.9
Min pTPM: 528.6
Std pTPM: 1051.7
Median pTPM: 2185.7
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
8181.9
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
7155.5
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
5031.8
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
5004.7
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
5001.9
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
4973.0
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
4640.3
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
4468.0
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
4119.3
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
4037.8
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
3994.7
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
3839.1
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
3774.4
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
3765.1
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
3639.8
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
3438.0
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
3364.9
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
3328.2
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
3300.3
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
3204.2
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
3201.4
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
3143.3
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
3141.5
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
3112.6
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
3100.8
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
3073.4
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
3070.0
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
3041.2
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
2972.1
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
2960.9
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
2943.4
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
2943.4
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
2890.6
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
2881.2
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
2863.4
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
2811.2
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
2791.9
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
2789.8
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
2786.2
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
2780.5
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
2760.4
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
2723.5
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
2701.1
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
2694.5
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
2636.9
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
2629.1
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
2624.2
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
2608.6
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
2606.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
2597.4
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
2532.4
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
2529.5
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
2526.8
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
2520.3
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
2509.1
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
2508.3
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
2495.9
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
2495.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
2489.4
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
2441.4
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
2392.8
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
2387.4
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
2385.5
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
2383.6
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
2376.4
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
2368.2
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
2338.7
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
2329.5
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
2309.9
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
2304.3
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
2286.2
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
2284.9
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
2271.9
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
2270.4
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
2260.0
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
2256.3
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
2231.6
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
2207.9
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
2204.6
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
2201.8
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
2169.6
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
2167.5
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
2165.4
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
2164.1
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
2161.9
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
2133.4
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
2114.6
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
2107.3
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
2090.3
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
2086.7
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
2075.8
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
2074.3
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
2069.9
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
2050.8
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
2050.6
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
2043.1
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
2039.5
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
2036.2
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
2035.2
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
2018.2
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
2014.7
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
2009.8
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
1974.1
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
1932.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
1928.3
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
1923.6
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
1904.8
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
1900.7
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
1899.3
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
1890.7
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
1889.8
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
1881.1
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
1838.4
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
1790.0
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
1773.7
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
1763.4
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
1711.6
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
1706.1
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
1688.2
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
1652.8
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
1632.0
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
1631.0
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
1628.6
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
1603.2
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
1595.5
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
1577.8
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
1559.3
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
1557.5
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
1547.0
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
1538.0
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
1524.1
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
1515.6
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
1510.4
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
1496.8
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
1496.7
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
1479.6
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
1453.9
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
1453.4
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
1451.1
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
1445.6
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
1437.0
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
1398.3
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
1394.2
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
1388.2
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
1385.1
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
1384.0
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
1370.8
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
1342.0
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
1316.5
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
1296.9
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
1181.3
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
1130.1
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
1088.4
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
939.6
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
917.0
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
887.9
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
880.9
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
716.1
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
593.3
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
528.6
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.