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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 687.7
Min pTPM: 5.5
Std pTPM: 118.2
Median pTPM: 111.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
687.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
471.8
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
393.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
391.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
383.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
367.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
342.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
336.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
328.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
316.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
289.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
270.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
269.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
263.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
257.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
247.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
242.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
241.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
237.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
237.2
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
226.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
223.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
218.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
218.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
206.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
198.6
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
198.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
195.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
195.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
193.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
185.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
183.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
181.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
180.6
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
179.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
178.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
170.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
165.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
162.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
159.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
154.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
153.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
145.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
145.3
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
141.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
135.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
133.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
125.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
116.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
111.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
110.7
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
110.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
105.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
103.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
103.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
103.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
99.9
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
99.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
96.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
93.0
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
91.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
90.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
86.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
85.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
80.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
77.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
76.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
72.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
69.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
68.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
61.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
58.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
57.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
56.9
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
55.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
52.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
50.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
41.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
41.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
36.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
35.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
35.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
32.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
28.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
27.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
27.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
27.1
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
26.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
26.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
26.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
25.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
23.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
21.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
18.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
16.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
14.5
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
12.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
11.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
9.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
5.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.