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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. pTPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in tubules: 60 Cells in glomeruli: 20 Fibroblasts: 5 Other cell types: 15
Female, age 67
Kidney sample 56 pTPM: 255
Cell types%
Cells in tubules: 70 Cells in glomeruli: 15 Fibroblasts: 10 Other cell types: 5
Female, age 55
Kidney sample 57 pTPM: 670.9
Cell types%
Cells in tubules: 80 Cells in glomeruli: 10 Fibroblasts: 5 Other cell types: 5
Male, age 46
Kidney sample 58 pTPM: 512.1
Cell types%
Cells in tubules: 60 Cells in glomeruli: 25 Fibroblasts: 5 Other cell types: 10
Female, age 57
Kidney sample 358 pTPM: 358.9
Cell types%
Cells in tubules: 60 Cells in glomeruli: 10 Fibroblasts: 10 Other cell types: 20
Male, age 78
Kidney sample 377 pTPM: 895.1
Cell types%
Cells in tubules: 65 Cells in glomeruli: 10 Fibroblasts: 5 Other cell types: 20
Male, age 73
Kidney sample 380 pTPM: 361.7
Cell types%
Cells in tubules: 60 Cells in glomeruli: 10 Fibroblasts: 10 Other cell types: 20
Female, age 59
Kidney sample 394 pTPM: 394.8
Cell types%
Cells in tubules: 65 Cells in glomeruli: 10 Fibroblasts: 10 Other cell types: 15
Female, age 48
Kidney sample 414 pTPM: 540
Cell types%
Cells in tubules: 60 Cells in glomeruli: 5 Fibroblasts: 10 Other cell types: 25
KIDNEY - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 4467.6
Min pTPM: 223.9
Std pTPM: 1184.5
Median pTPM: 699.8
GTEX-11TTK-1926-SM-5PNW8
60-69 years, female
4467.6
GTEX-12696-0926-SM-5FQTV
60-69 years, male
4354.6
GTEX-13OVI-1126-SM-5KLZF
60-69 years, female
4190.7
GTEX-1399S-0526-SM-5IJG8
30-39 years, female
3325.8
GTEX-13RTJ-2226-SM-5S2Q1
60-69 years, male
3292.4
GTEX-ZLFU-0926-SM-5P9F8
40-49 years, male
3219.8
GTEX-RN64-1626-SM-48FD7
50-59 years, male
3144.9
GTEX-17F97-1926-SM-7IGM4
50-59 years, male
2301.7
GTEX-1A3MW-2226-SM-73KUX
60-69 years, female
2036.9
GTEX-1AX8Z-2326-SM-731CR
60-69 years, male
1908.7
GTEX-147F4-2626-SM-5Q5CS
50-59 years, male
1847.0
GTEX-14C39-2126-SM-664OH
40-49 years, male
1833.4
GTEX-XPVG-0526-SM-4B65N
50-59 years, male
1751.2
GTEX-ZVZP-0926-SM-5GIDB
50-59 years, male
1711.9
GTEX-NPJ8-2226-SM-3TW8D
40-49 years, male
1543.0
GTEX-145MN-0326-SM-5QGQI
30-39 years, male
1525.8
GTEX-ZYFG-1626-SM-5GZYY
60-69 years, female
1282.5
GTEX-QLQW-1626-SM-4R1K1
30-39 years, male
1187.7
GTEX-1C6VQ-2326-SM-7IGN1
50-59 years, male
1166.8
GTEX-13112-2126-SM-5GCO4
50-59 years, male
887.5
GTEX-ZYT6-2226-SM-5GIC9
30-39 years, male
881.8
GTEX-13O1R-2526-SM-5N9FW
60-69 years, male
727.1
GTEX-P4QS-1126-SM-3NMD5
60-69 years, male
699.8
GTEX-13OVL-1826-SM-5KLZR
50-59 years, male
668.7
GTEX-12WSG-0826-SM-5EQ5A
50-59 years, female
638.1
GTEX-13NYB-1726-SM-5N9G2
40-49 years, male
633.5
GTEX-ZE9C-1426-SM-4WKGM
60-69 years, male
609.2
GTEX-14C5O-2026-SM-5YYB1
60-69 years, male
604.1
GTEX-14E6D-2526-SM-5YYA9
50-59 years, male
573.8
GTEX-1497J-0826-SM-5NQAJ
60-69 years, male
570.1
GTEX-11GS4-2326-SM-5A5KS
60-69 years, male
518.0
GTEX-15CHQ-2126-SM-6871M
60-69 years, male
515.7
GTEX-QDVN-1626-SM-48TZC
50-59 years, male
511.3
GTEX-T5JC-1526-SM-4DM68
20-29 years, male
490.3
GTEX-ZC5H-1726-SM-5HL7X
40-49 years, female
446.2
GTEX-1BAJH-1826-SM-731DA
70-79 years, male
420.7
GTEX-1EKGG-2226-SM-7IGOA
60-69 years, male
410.6
GTEX-Y5V6-2026-SM-5IFHO
60-69 years, male
350.3
GTEX-17HHY-2326-SM-7KFSR
50-59 years, male
340.0
GTEX-N7MS-1626-SM-3LK5F
60-69 years, male
333.0
GTEX-11OF3-1326-SM-5N9FJ
60-69 years, male
299.9
GTEX-ZDXO-0226-SM-4WKH7
60-69 years, male
292.3
GTEX-13OW6-1826-SM-5N9F9
50-59 years, male
277.4
GTEX-15DYW-2026-SM-6AJBD
60-69 years, female
231.5
GTEX-16MT8-1926-SM-7EPGL
60-69 years, female
223.9
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KIDNEY - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.