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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 2612.0
Min pTPM: 21.3
Std pTPM: 548.0
Median pTPM: 622.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
2612.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
2030.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
1976.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
1948.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
1899.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
1819.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
1691.1
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
1672.1
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
1526.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
1495.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
1472.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
1447.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
1350.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
1341.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
1337.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
1321.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
1310.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
1258.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
1201.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
1173.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
1134.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
1099.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
1086.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
1046.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
1027.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
1015.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
1009.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
983.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
980.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
940.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
936.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
932.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
921.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
899.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
886.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
876.1
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
864.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
854.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
852.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
807.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
785.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
781.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
752.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
733.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
717.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
684.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
680.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
673.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
650.6
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
628.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
615.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
607.3
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
604.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
587.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
562.0
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
540.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
538.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
525.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
517.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
488.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
475.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
474.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
440.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
411.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
386.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
377.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
362.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
356.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
331.6
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
329.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
312.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
295.1
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
265.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
262.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
245.7
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
221.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
211.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
200.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
196.9
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
193.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
191.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
180.5
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
179.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
176.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
164.7
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
162.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
156.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
148.2
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
132.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
122.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
104.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
104.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
103.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
90.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
79.3
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
73.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
72.1
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
68.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
55.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
21.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.