We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 4249.3
Min pTPM: 9.7
Std pTPM: 683.3
Median pTPM: 249.9
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
4249.3
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
3786.5
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
2335.4
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
1355.6
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
1302.9
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
1236.0
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
1196.6
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
1181.4
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
1141.0
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
1056.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
1049.3
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
1017.9
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
939.5
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
921.8
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
863.7
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
773.3
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
733.1
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
724.5
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
658.3
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
613.8
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
607.6
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
538.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
530.8
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
518.7
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
504.3
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
485.0
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
483.7
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
474.1
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
466.6
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
456.3
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
425.5
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
423.7
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
404.2
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
400.0
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
398.2
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
393.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
360.9
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
341.5
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
327.8
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
300.6
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
273.2
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
270.1
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
262.7
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
250.2
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
249.6
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
247.6
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
245.1
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
234.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
220.7
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
203.3
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
198.7
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
183.8
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
156.4
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
133.1
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
130.7
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
121.1
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
93.6
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
90.8
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
82.0
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
81.5
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
78.6
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
77.3
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
75.2
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
74.5
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
73.5
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
68.5
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
62.3
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
61.8
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
53.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
52.7
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
51.3
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
44.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
41.6
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
41.5
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
41.4
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
38.8
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
35.7
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
33.8
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
32.3
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
27.4
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
25.0
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
23.9
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
22.3
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
21.7
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
20.0
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
14.7
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
14.3
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
9.7
Show allShow less
MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.