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UROTHELIAL CANCER - Interactive survival scatter ploti
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FBN1 is prognostic, high expression is unfavourable in urothelial cancer
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
: Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
4.2
Number of samples
406
Samples
Sample
Description
FPKM
TCGA-DK-A3IQ-01A
74 years, male, white, stage:iii, dead, 539 days
42.0
TCGA-XF-AAN8-01A
74 years, female, white, stage:iii, dead, 118 days
31.5
TCGA-FD-A62S-01A
60 years, female, black or african american, stage:iii, dead, 406 days
28.1
TCGA-FD-A3B7-01A
66 years, male, black or african american, stage:iii, dead, 122 days
25.0
TCGA-FD-A5BZ-01A
77 years, female, white, stage:iv, dead, 835 days
24.6
TCGA-XF-AAMJ-01A
70 years, male, asian, stage:iii, dead, 1670 days
22.7
TCGA-DK-A1AF-01A
84 years, female, white, stage:iv, alive, 536 days
22.1
TCGA-FD-A3SP-01A
60 years, male, white, stage:iii, alive, 783 days
21.0
TCGA-K4-A5RH-01A
69 years, male, white, stage:iii, alive, 276 days
20.5
TCGA-DK-A1AB-01A
74 years, female, white, stage:iv, dead, 508 days
20.3
TCGA-BT-A20O-01A
75 years, male, white, stage:iii, dead, 370 days
18.4
TCGA-BL-A5ZZ-01A
80 years, female, white, stage:iii, alive, 377 days
18.4
TCGA-FD-A5BT-01A
84 years, male, white, stage:iii, dead, 328 days
16.8
TCGA-XF-AAME-01A
64 years, female, white, stage:ii, dead, 2828 days
16.5
TCGA-XF-A9SW-01A
85 years, male, white, stage:iv, dead, 362 days
15.9
TCGA-K4-A3WS-01A
66 years, male, white, stage:iii, alive, 761 days
15.5
TCGA-FD-A3B8-01A
56 years, male, white, stage:ii, alive, 384 days
15.4
TCGA-ZF-A9RF-01A
74 years, male, white, stage:ii, alive, 1949 days
14.8
TCGA-FD-A6TK-01A
60 years, male, white, stage:iii, alive, 330 days
14.6
TCGA-SY-A9G0-01A
82 years, male, white, stage:iv, dead, 1008 days
14.5
TCGA-DK-A2I4-01A
79 years, male, white, stage:iii, alive, 4343 days
14.3
TCGA-BT-A2LD-01A
78 years, female, white, stage:iv, dead, 623 days
14.2
TCGA-DK-A3IU-01A
58 years, male, white, stage:ii, dead, 706 days
13.9
TCGA-XF-AAN4-01A
77 years, female, white, stage:iii, dead, 823 days
13.5
TCGA-FD-A5BS-01A
68 years, male, white, stage:iii, alive, 1639 days
13.3
TCGA-BT-A20R-01A
79 years, female, white, stage:iv, dead, 154 days
13.2
TCGA-ZF-AA4R-01A
67 years, male, white, stage:iv, dead, 1036 days
13.0
TCGA-XF-AAMT-01A
75 years, female, white, stage:iv, dead, 90 days
12.7
TCGA-ZF-AA54-01A
71 years, male, white, stage:iii, dead, 590 days
12.7
TCGA-DK-A1A5-01A
79 years, male, white, stage:ii, dead, 65 days
12.6
TCGA-FD-A3SQ-01A
62 years, male, white, stage:iv, dead, 1423 days
12.6
TCGA-XF-AAMX-01A
87 years, female, black or african american, stage:iii, dead, 206 days
12.3
TCGA-DK-A6B2-01A
70 years, male, white, stage:iv, alive, 477 days
12.2
TCGA-DK-A3WX-01A
67 years, female, white, stage:iii, dead, 321 days
11.8
TCGA-DK-AA6S-01A
60 years, male, white, stage:iii, alive, 5050 days
11.6
TCGA-ZF-AA5H-01A
60 years, female, white, stage:iv, alive, 897 days
11.6
TCGA-XF-A9T3-01A
69 years, female, white, stage:iv, alive, 68 days
11.5
TCGA-FD-A3SO-01A
68 years, male, white, stage:iv, dead, 168 days
11.2
TCGA-DK-A2HX-01A
80 years, female, white, stage:iv, dead, 1420 days
11.1
TCGA-4Z-AA86-01A
67 years, male, black or african american, stage:iv, dead, 311 days
11.1
TCGA-GD-A3OS-01A
54 years, female, white, stage:ii, alive, 638 days
10.9
TCGA-XF-A9SP-01A
59 years, male, white, stage:iii, dead, 454 days
10.9
TCGA-XF-A9SV-01A
82 years, male, white, stage:iv, dead, 388 days
10.6
TCGA-FD-A3SL-01A
60 years, male, white, stage:iv, dead, 712 days
10.5
TCGA-XF-A9SK-01A
65 years, male, white, stage:iv, dead, 486 days
10.1
TCGA-E7-A7DV-01A
44 years, male, white, stage:iv, alive, 37 days
10.1
TCGA-BT-A3PJ-01A
76 years, male, white, stage:iii, alive, 789 days
9.9
TCGA-FD-A3SM-01A
70 years, male, white, stage:iv, dead, 547 days
9.7
TCGA-DK-AA74-01A
75 years, male, white, stage:iii, alive, 1708 days
9.5
TCGA-XF-A9SL-01A
69 years, male, white, stage:iv, dead, 2020 days
9.5
TCGA-XF-A9T2-01A
54 years, male, white, stage:iii, dead, 575 days
9.5
TCGA-UY-A9PB-01A
49 years, male, white, stage:iii, alive, 899 days
9.2
TCGA-FD-A6TC-01A
79 years, female, white, stage:iii, alive, 187 days
9.0
TCGA-FD-A3SS-01A
66 years, male, white, stage:iv, dead, 391 days
9.0
TCGA-FD-A3SR-01A
68 years, male, white, stage:iv, dead, 602 days
8.9
TCGA-XF-A9SY-01A
60 years, female, white, stage:iv, alive, 640 days
8.7
TCGA-FT-A61P-01A
76 years, male, white, stage:iv, alive, 337 days
8.6
TCGA-XF-AAMY-01A
78 years, male, white, stage:iii, alive, 3011 days
8.5
TCGA-GC-A3YS-01A
61 years, male, white, stage:iv, alive, 758 days
8.5
TCGA-XF-AAN7-01A
60 years, male, white, stage:iv, dead, 565 days
8.4
TCGA-BL-A13J-01A
65 years, male, white, stage:iv, dead, 81 days
8.4
TCGA-FD-A62N-01A
69 years, male, asian, stage:iii, alive, 82 days
8.3
TCGA-XF-A9SM-01A
76 years, male, white, stage:iii, alive, 1048 days
8.2
TCGA-XF-AAMR-01A
48 years, male, white, stage:iii, alive, 2790 days
8.0
TCGA-DK-A3WY-01A
67 years, female, white, stage:iii, alive, 4967 days
7.9
TCGA-SY-A9G5-01A
66 years, male, white, stage:iii, alive, 1186 days
7.9
TCGA-GU-AATP-01A
74 years, male, white, stage:iv, alive, 1003 days
7.9
TCGA-4Z-AA7N-01A
66 years, male, white, stage:iii, dead, 1367 days
7.8
TCGA-UY-A8OC-01A
90 years, male, white, stage:iv, dead, 92 days
7.7
TCGA-K4-A83P-01A
77 years, male, white, stage:iv, alive, 495 days
7.7
TCGA-BT-A20Q-01A
73 years, male, white, stage:iv, dead, 593 days
7.7
TCGA-XF-A9SZ-01A
79 years, male, white, stage:iv, dead, 859 days
7.7
TCGA-FD-A3B3-01A
74 years, female, white, stage:iii, dead, 974 days
7.6
TCGA-FD-A6TB-01A
82 years, male, white, stage:iii, alive, 572 days
7.6
TCGA-R3-A69X-01A
70 years, male, white, stage:iii, alive, 433 days
7.5
TCGA-G2-A2EO-01A
69 years, male, white, stage:iii, dead, 1804 days
7.4
TCGA-FD-A6TA-01A
58 years, male, white, stage:iv, alive, 1912 days
7.4
TCGA-ZF-A9R9-01A
58 years, male, white, stage:iv, dead, 864 days
7.3
TCGA-ZF-AA52-01A
70 years, male, white, stage:iii, dead, 1077 days
7.3
TCGA-KQ-A41S-01A
87 years, female, white, stage:iii, alive, 35 days
7.2
TCGA-E7-A6MD-01A
66 years, male, white, stage:iv, alive, 129 days
7.2
TCGA-BT-A3PK-01A
80 years, male, white, stage:ii, dead, 303 days
7.1
TCGA-FD-A6TI-01A
73 years, male, white, stage:iv, dead, 294 days
7.0
TCGA-DK-A3IN-01A
72 years, male, white, stage:iii, dead, 250 days
7.0
TCGA-YC-A8S6-01A
71 years, male, white, stage:ii, alive, 293 days
7.0
TCGA-BT-A2LB-01A
73 years, female, white, stage:iii, dead, 492 days
7.0
TCGA-GU-A764-01A
66 years, male, white, stage:ii, alive, 610 days
6.9
TCGA-K4-AAQO-01A
56 years, male, white, stage:iii, alive, 359 days
6.9
TCGA-FD-A6TG-01A
73 years, male, white, stage:iv, dead, 93 days
6.9
TCGA-BL-A3JM-01A
63 years, male, white, stage:iii, dead, 205 days
6.9
TCGA-G2-A2EC-01A
58 years, female, black or african american, stage:ii, dead, 696 days
6.9
TCGA-CU-A0YN-01A
60 years, male, white, stage:iii, dead, 393 days
6.9
TCGA-XF-A9SX-01A
63 years, female, white, stage:iv, dead, 719 days
6.8
TCGA-K4-A54R-01A
59 years, male, white, stage:ii, alive, 842 days
6.8
TCGA-ZF-AA5P-01A
65 years, male, white, stage:iv, alive, 372 days
6.6
TCGA-C4-A0F6-01A
82 years, female, stage:iii, alive, 700 days
6.6
TCGA-XF-A9T4-01A
48 years, male, white, stage:iv, dead, 495 days
6.6
TCGA-FD-A6TD-01A
77 years, male, white, stage:iii, dead, 386 days
6.5
TCGA-XF-A8HH-01A
61 years, female, white, stage:iv, dead, 57 days
6.4
TCGA-BL-A13I-01A
57 years, female, white, stage:iii, dead, 223 days
6.4
TCGA-K4-A6MB-01A
64 years, male, white, stage:iv, alive, 469 days
6.2
TCGA-G2-AA3C-01A
66 years, male, white, stage:iv, dead, 211 days
6.2
TCGA-DK-A3IT-01A
62 years, male, white, stage:iii, alive, 648 days
6.1
TCGA-XF-AAN3-01A
76 years, male, white, stage:iv, alive, 2625 days
6.1
TCGA-XF-A9SI-01A
73 years, female, asian, stage:ii, alive, 2423 days
5.9
TCGA-ZF-AA4N-01A
74 years, male, white, stage:ii, dead, 88 days
5.9
TCGA-G2-A2ES-01A
85 years, male, white, stage:ii, dead, 1004 days
5.7
TCGA-DK-A2I2-01A
63 years, female, white, stage:iv, dead, 237 days
5.7
TCGA-FD-A6TH-01A
63 years, male, white, stage:iv, dead, 131 days
5.6
TCGA-4Z-AA82-01A
59 years, male, black or african american, stage:iv, dead, 1556 days
5.5
TCGA-BT-A20T-01A
63 years, male, white, stage:iv, dead, 453 days
5.5
TCGA-HQ-A5NE-01A
56 years, male, stage:iii, dead, 370 days
5.5
TCGA-UY-A9PD-01A
81 years, male, white, stage:iii, alive, 542 days
5.3
TCGA-UY-A8OD-01A
67 years, female, black or african american, stage:ii, alive, 3432 days
5.2
TCGA-FD-A5BU-01A
76 years, female, black or african american, stage:ii, alive, 588 days
5.2
TCGA-DK-A2I1-01A
73 years, female, white, stage:ii, alive, 546 days
5.2
TCGA-ZF-AA5N-01A
62 years, female, white, stage:iv, dead, 168 days
5.1
TCGA-FJ-A871-01A
49 years, male, white, stage:iii, dead, 272 days
5.1
TCGA-FD-A43U-01A
70 years, male, white, stage:iv, alive, 636 days
5.0
TCGA-G2-A2EF-01A
50 years, male, white, stage:ii, alive, 1884 days
4.9
TCGA-FD-A5BY-01A
63 years, female, white, stage:iii, alive, 251 days
4.9
TCGA-DK-A1A3-01A
60 years, male, white, stage:iv, dead, 665 days
4.9
TCGA-FD-A6TF-01A
80 years, female, white, stage:iv, dead, 69 days
4.9
TCGA-K4-A5RJ-01A
75 years, male, white, stage:ii, alive, 539 days
4.9
TCGA-K4-A3WU-01B
88 years, male, white, stage:iii, alive, 105 days
4.8
TCGA-FD-A5C1-01A
61 years, female, white, stage:iii, alive, 1792 days
4.8
TCGA-CU-A72E-01A
76 years, male, white, stage:iv, dead, 413 days
4.7
TCGA-GU-A762-01A
87 years, male, white, stage:iv, dead, 232 days
4.6
TCGA-GD-A3OP-01A
84 years, female, white, stage:iv, alive, 64 days
4.4
TCGA-BT-A20U-01A
70 years, female, white, stage:iii, dead, 455 days
4.4
TCGA-2F-A9KW-01A
67 years, female, white, stage:iii, dead, 254 days
4.4
TCGA-XF-A9SJ-01A
83 years, male, white, stage:iv, dead, 98 days
4.3
TCGA-BL-A0C8-01A
73 years, male, white, stage:i, alive, 1219 days
4.3
TCGA-K4-A4AB-01B
76 years, male, white, stage:iii, alive, 84 days
4.3
TCGA-BT-A0S7-01A
75 years, male, white, stage:iii, dead, 200 days
4.2
TCGA-XF-A9T8-01A
64 years, male, white, stage:iii, dead, 418 days
4.2
TCGA-XF-AAMG-01A
49 years, male, white, stage:iii, alive, 3364 days
4.2
TCGA-FD-A43N-01A
76 years, male, white, stage:iii, alive, 230 days
4.1
TCGA-GC-A3I6-01A
45 years, male, white, stage:iii, dead, 630 days
4.1
TCGA-FD-A3NA-01A
60 years, male, white, stage:ii, alive, 1845 days
4.1
TCGA-XF-AAMW-01A
79 years, female, white, stage:iv, dead, 253 days
4.1
TCGA-FD-A43S-01A
71 years, female, white, stage:iii, alive, 455 days
4.0
TCGA-ZF-AA58-01A
61 years, female, white, stage:iv, alive, 1649 days
4.0
TCGA-XF-A9SU-01A
74 years, female, white, stage:iv, dead, 182 days
4.0
TCGA-E7-A97P-01A
73 years, male, asian, stage:ii, dead, 437 days
3.8
TCGA-GD-A2C5-01A
53 years, female, white, stage:iv, alive, 812 days
3.8
TCGA-FD-A3B4-01A
55 years, female, black or african american, stage:iii, dead, 510 days
3.8
TCGA-XF-A8HD-01A
77 years, male, white, stage:iii, alive, 2964 days
3.8
TCGA-CU-A0YR-01A
84 years, male, white, stage:iv, dead, 460 days
3.7
TCGA-FD-A3B5-01A
86 years, male, black or african american, stage:iv, dead, 272 days
3.7
TCGA-E7-A97Q-01A
60 years, female, white, stage:iv, dead, 246 days
3.7
TCGA-BT-A2LA-01A
54 years, male, white, stage:iii, alive, 522 days
3.6
TCGA-FD-A5BR-01A
57 years, male, white, stage:ii, alive, 813 days
3.6
TCGA-XF-A8HE-01A
47 years, male, white, stage:iii, alive, 3817 days
3.6
TCGA-FD-A3SN-01A
79 years, male, white, stage:iii, alive, 887 days
3.6
TCGA-FD-A62P-01A
76 years, male, white, stage:ii, dead, 191 days
3.5
TCGA-FD-A43Y-01A
65 years, male, white, stage:iii, dead, 474 days
3.5
TCGA-BT-A20X-01A
56 years, male, white, stage:iv, dead, 251 days
3.5
TCGA-FD-A3N5-01A
69 years, male, black or african american, stage:ii, dead, 685 days
3.5
TCGA-UY-A78M-01A
81 years, female, asian, stage:iv, dead, 690 days
3.5
TCGA-FD-A5BX-01A
82 years, male, white, stage:iv, dead, 173 days
3.5
TCGA-ZF-AA4V-01A
66 years, male, white, stage:iii, alive, 1806 days
3.4
TCGA-5N-A9KI-01A
76 years, female, white, stage:iii, dead, 76 days
3.4
TCGA-KQ-A41P-01A
76 years, male, white, stage:iv, alive, 1094 days
3.4
TCGA-CF-A9FL-01A
85 years, male, asian, stage:iii, dead, 565 days
3.3
TCGA-XF-A9T0-01A
69 years, male, white, stage:iii, alive, 799 days
3.3
TCGA-UY-A78L-01A
62 years, male, white, stage:iv, alive, 1127 days
3.3
TCGA-ZF-A9RC-01A
77 years, male, white, stage:iii, alive, 2868 days
3.3
TCGA-DK-AA6X-01A
63 years, male, white, stage:ii, alive, 467 days
3.2
TCGA-C4-A0F7-01A
77 years, male, stage:iv, dead, 62 days
3.1
TCGA-2F-A9KO-01A
63 years, male, white, stage:iv, dead, 734 days
3.0
TCGA-GC-A3OO-01A
79 years, male, white, stage:ii, alive, 481 days
3.0
TCGA-FD-A43P-01A
74 years, male, black or african american, stage:ii, alive, 832 days
3.0
TCGA-GV-A3QI-01A
47 years, male, white, stage:iii, alive, 1110 days
3.0
TCGA-GV-A3JV-01A
66 years, male, white, stage:iv, dead, 434 days
3.0
TCGA-FJ-A3Z7-01A
76 years, male, white, stage:iv, alive, 945 days
3.0
TCGA-ZF-AA56-01A
79 years, female, white, stage:iii, dead, 259 days
2.9
TCGA-UY-A78P-01A
78 years, female, white, stage:ii, alive, 2380 days
2.9
TCGA-BT-A20N-01A
72 years, male, stage:iii, dead, 795 days
2.9
TCGA-BT-A20W-01A
71 years, male, white, stage:ii, dead, 254 days
2.9
TCGA-UY-A8OB-01A
64 years, male, white, stage:iv, alive, 2109 days
2.9
TCGA-BT-A20J-01A
75 years, male, white, stage:ii, dead, 579 days
2.8
TCGA-CF-A7I0-01A
54 years, male, asian, stage:ii, alive, 368 days
2.8
TCGA-FD-A5C0-01A
61 years, male, white, stage:iv, dead, 550 days
2.8
TCGA-GC-A3RC-01A
59 years, male, white, stage:ii, alive, 484 days
2.7
TCGA-DK-A3IK-01A
87 years, male, white, stage:iv, dead, 146 days
2.7
TCGA-DK-A1AC-01A
72 years, male, white, stage:iii, alive, 3981 days
2.7
TCGA-C4-A0F1-01A
71 years, male, stage:iii, alive, 89 days
2.7
TCGA-ZF-AA53-01A
60 years, male, white, stage:ii, alive, 1761 days
2.7
TCGA-DK-A1AE-01A
84 years, male, white, stage:iii, alive, 491 days
2.7
TCGA-GV-A3JZ-01A
55 years, male, white, stage:iv, alive, 603 days
2.6
TCGA-ZF-AA51-01A
69 years, female, white, stage:ii, alive, 1714 days
2.5
TCGA-4Z-AA7O-01A
64 years, male, black or african american, stage:ii, alive, 512 days
2.5
TCGA-DK-A1A6-01A
53 years, male, white, stage:iv, alive, 2020 days
2.5
TCGA-UY-A9PH-01A
73 years, male, white, stage:ii, alive, 1561 days
2.5
TCGA-CF-A1HS-01A
75 years, female, asian, stage:iii, alive, 382 days
2.5
TCGA-DK-AA6R-01A
69 years, male, white, stage:iv, alive, 5041 days
2.5
TCGA-LC-A66R-01A
78 years, male, white, stage:iv, alive, 466 days
2.5
TCGA-2F-A9KT-01A
83 years, male, white, stage:ii, alive, 3314 days
2.5
TCGA-PQ-A6FN-01A
78 years, female, white, stage:iii, alive, 507 days
2.5
TCGA-GC-A3WC-01A
80 years, female, white, stage:iii, alive, 540 days
2.4
TCGA-4Z-AA84-01A
61 years, male, white, stage:iv, alive, 460 days
2.4
TCGA-DK-A1AD-01A
69 years, male, white, stage:iv, alive, 3420 days
2.3
TCGA-UY-A78K-01A
60 years, male, white, stage:iv, dead, 536 days
2.3
TCGA-FD-A3SJ-01A
59 years, male, white, stage:iv, dead, 739 days
2.3
TCGA-XF-A8HF-01A
80 years, male, white, stage:iii, dead, 2954 days
2.3
TCGA-XF-A9T5-01A
78 years, female, white, stage:iv, alive, 2027 days
2.3
TCGA-FD-A62O-01A
74 years, male, white, stage:iv, dead, 216 days
2.3
TCGA-FD-A3B6-01A
75 years, male, white, stage:ii, dead, 1005 days
2.3
TCGA-C4-A0EZ-01A
69 years, female, stage:iv, dead, 273 days
2.2
TCGA-ZF-A9RN-01A
67 years, female, white, stage:iii, dead, 615 days
2.2
TCGA-5N-A9KM-01A
73 years, female, white, stage:iii, dead, 530 days
2.1
TCGA-XF-AAN0-01A
68 years, male, white, stage:iv, dead, 1718 days
2.1
TCGA-GU-AATO-01A
75 years, male, white, stage:iv, dead, 324 days
2.1
TCGA-4Z-AA7R-01A
73 years, male, black or african american, stage:iv, dead, 522 days
2.1
TCGA-BT-A0YX-01A
70 years, female, white, stage:iii, dead, 400 days
2.1
TCGA-C4-A0F0-01A
60 years, male, stage:ii, alive, 59 days
2.1
TCGA-CU-A0YO-01A
84 years, male, white, stage:iv, dead, 149 days
2.1
TCGA-S5-A6DX-01A
83 years, male, white, stage:iv, dead, 56 days
2.0
TCGA-DK-A3X1-01A
78 years, female, white, stage:iii, alive, 2009 days
2.0
TCGA-DK-A3IL-01A
79 years, female, white, stage:iv, dead, 413 days
2.0
TCGA-FT-A3EE-01A
80 years, female, white, stage:iii, dead, 99 days
2.0
TCGA-UY-A9PE-01A
87 years, male, white, stage:iv, alive, 189 days
1.9
TCGA-GU-A767-01A
81 years, male, white, stage:iv, dead, 144 days
1.9
TCGA-K4-A5RI-01A
67 years, female, white, stage:iii, dead, 356 days
1.9
TCGA-XF-AAN2-01A
73 years, male, white, stage:ii, dead, 1869 days
1.9
TCGA-2F-A9KQ-01A
69 years, male, white, stage:iii, alive, 2886 days
1.8
TCGA-GV-A40E-01A
75 years, male, white, stage:ii, dead, 261 days
1.8
TCGA-GD-A3OQ-01A
48 years, male, white, stage:iv, alive, 95 days
1.8
TCGA-E7-A85H-01A
64 years, male, asian, stage:iii, alive, 394 days
1.8
TCGA-XF-AAMH-01A
80 years, male, white, stage:iv, dead, 344 days
1.8
TCGA-FD-A5BV-01A
47 years, female, white, stage:iii, dead, 163 days
1.7
TCGA-UY-A78N-01A
79 years, male, white, stage:iv, dead, 2641 days
1.7
TCGA-4Z-AA7M-01A
65 years, male, white, stage:iii, alive, 495 days
1.7
TCGA-XF-AAN5-01A
61 years, female, white, stage:iii, alive, 2293 days
1.7
TCGA-E7-A3X6-01A
70 years, male, white, stage:ii, dead, 904 days
1.7
TCGA-GU-A766-01A
62 years, male, white, stage:ii, alive, 480 days
1.7
TCGA-CU-A3YL-01A
67 years, male, white, stage:iii, alive, 906 days
1.6
TCGA-K4-A3WV-01A
77 years, female, white, stage:ii, alive, 646 days
1.6
TCGA-GC-A6I3-01A
90 years, female, black or african american, stage:iv, alive, 423 days
1.6
TCGA-DK-AA6W-01A
79 years, male, white, stage:ii, dead, 415 days
1.5
TCGA-4Z-AA83-01A
52 years, male, white, stage:ii, alive, 2024 days
1.5
TCGA-DK-A6AW-01A
70 years, male, white, stage:ii, alive, 1621 days
1.5
TCGA-ZF-A9RD-01A
75 years, female, white, stage:iv, dead, 408 days
1.5
TCGA-XF-AAMQ-01A
59 years, female, white, stage:ii, alive, 2177 days
1.5
TCGA-G2-A2EK-01A
57 years, male, white, stage:ii, alive, 485 days
1.5
TCGA-DK-A6B1-01A
67 years, male, white, stage:ii, alive, 2049 days
1.5
TCGA-DK-AA6M-01A
64 years, female, white, stage:ii, alive, 1582 days
1.5
TCGA-G2-AA3F-01A
77 years, male, white, stage:iv, alive, 893 days
1.4
TCGA-BT-A3PH-01A
76 years, male, white, stage:iv, dead, 142 days
1.4
TCGA-MV-A51V-01A
75 years, male, white, stage:iii, alive, 410 days
1.4
TCGA-DK-A3WW-01A
57 years, male, white, stage:iii, alive, 633 days
1.4
TCGA-HQ-A2OF-01A
52 years, female, stage:iii, alive, 1947 days
1.4
TCGA-H4-A2HO-01A
53 years, male, white, stage:iii, alive, 46 days
1.4
TCGA-G2-A2EL-01A
77 years, male, white, stage:ii, dead, 819 days
1.4
TCGA-CU-A3KJ-01A
75 years, male, white, stage:iii, alive, 562 days
1.4
TCGA-YC-A89H-01A
78 years, female, white, stage:ii, alive, 573 days
1.4
TCGA-BT-A42F-01A
64 years, male, white, stage:iv, alive, 864 days
1.4
TCGA-FD-A3N6-01A
43 years, female, black or african american, stage:ii, alive, 851 days
1.4
TCGA-XF-AAMZ-01A
81 years, female, white, stage:iv, dead, 1348 days
1.3
TCGA-DK-AA6T-01A
63 years, male, white, stage:ii, alive, 572 days
1.3
TCGA-GC-A3BM-01A
70 years, male, white, stage:ii, dead, 651 days
1.3
TCGA-4Z-AA7S-01A
66 years, male, black or african american, stage:iii, dead, 1064 days
1.3
TCGA-DK-A2I6-01A
81 years, male, white, stage:iv, alive, 2656 days
1.3
TCGA-CF-A1HR-01A
62 years, male, asian, stage:iii, alive, 389 days
1.3
TCGA-CF-A9FF-01A
52 years, male, asian, stage:ii, alive, 361 days
1.3
TCGA-UY-A9PF-01A
78 years, male, white, stage:iv, alive, 117 days
1.2
TCGA-E7-A677-01A
81 years, male, asian, stage:ii, alive, 820 days
1.2
TCGA-DK-A6B5-01A
45 years, male, white, stage:iv, alive, 1542 days
1.2
TCGA-UY-A78O-01A
74 years, female, white, stage:ii, alive, 2312 days
1.2
TCGA-E7-A541-01A
66 years, male, white, stage:ii, dead, 778 days
1.2
TCGA-CF-A47V-01A
52 years, male, asian, stage:ii, alive, 379 days
1.1
TCGA-KQ-A41Q-01A
89 years, male, white, stage:iii, alive, 1429 days
1.1
TCGA-E7-A5KE-01A
78 years, female, asian, stage:ii, alive, 17 days
1.1
TCGA-GU-AATQ-01A
69 years, male, white, stage:iii, dead, 213 days
1.1
TCGA-ZF-A9R3-01A
53 years, female, white, stage:ii, dead, 949 days
1.1
TCGA-ZF-A9R0-01A
82 years, male, white, stage:iii, dead, 680 days
1.1
TCGA-DK-A1AA-01A
57 years, male, white, stage:iii, alive, 578 days
1.0
TCGA-CU-A5W6-01A
70 years, male, white, stage:iii, dead, 56 days
1.0
TCGA-GV-A3JX-01A
59 years, male, white, stage:iii, alive, 581 days
1.0
TCGA-4Z-AA7W-01A
55 years, male, white, stage:ii, alive, 840 days
1.0
TCGA-XF-A9SH-01A
65 years, female, asian, stage:ii, dead, 1971 days
1.0
TCGA-GC-A3RD-01A
83 years, female, white, stage:iii, alive, 428 days
1.0
TCGA-4Z-AA7Q-01A
79 years, male, white, stage:iii, dead, 510 days
1.0
TCGA-ZF-A9R1-01A
81 years, male, white, stage:iv, alive, 773 days
1.0
TCGA-DK-A6AV-01A
82 years, female, asian, stage:ii, alive, 1952 days
1.0
TCGA-E7-A6ME-01A
75 years, male, asian, stage:ii, alive, 731 days
1.0
TCGA-4Z-AA87-01A
72 years, male, black or african american, stage:iii, alive, 1454 days
1.0
TCGA-DK-AA6L-01A
48 years, male, white, stage:iv, dead, 1163 days
1.0
TCGA-DK-AA71-01A
71 years, male, white, stage:ii, alive, 415 days
0.9
TCGA-K4-A4AC-01A
83 years, male, white, stage:ii, dead, 278 days
0.9
TCGA-GV-A3JW-01A
74 years, male, white, stage:ii, alive, 649 days
0.9
TCGA-GU-A42P-01A
72 years, male, white, stage:iv, dead, 332 days
0.9
TCGA-KQ-A41N-01A
73 years, male, black or african american, stage:iii, alive, 1604 days
0.9
TCGA-BT-A42E-01A
74 years, male, white, stage:iii, alive, 1108 days
0.9
TCGA-2F-A9KP-01A
66 years, male, white, stage:iv, dead, 364 days
0.9
TCGA-GV-A40G-01A
77 years, male, white, stage:ii, alive, 580 days
0.9
TCGA-GU-A42R-01A
68 years, male, white, stage:iv, dead, 577 days
0.8
TCGA-GU-A42Q-01A
67 years, male, white, stage:iii, dead, 344 days
0.8
TCGA-DK-AA77-01A
61 years, male, white, stage:ii, alive, 618 days
0.8
TCGA-GC-A6I1-01A
90 years, female, white, stage:ii, dead, 272 days
0.8
TCGA-2F-A9KR-01A
59 years, female, stage:iii, dead, 3183 days
0.8
TCGA-K4-A6FZ-01A
75 years, female, white, stage:iii, alive, 55 days
0.8
TCGA-GD-A76B-01A
86 years, female, white, stage:ii, dead, 224 days
0.8
TCGA-GV-A6ZA-01A
54 years, male, white, stage:ii, alive, 691 days
0.8
TCGA-GV-A3QF-01A
79 years, male, white, stage:iv, dead, 617 days
0.8
TCGA-E7-A8O7-01A
52 years, male, asian, stage:ii, alive, 466 days
0.7
TCGA-DK-AA6P-01A
72 years, female, white, stage:ii, alive, 457 days
0.7
TCGA-4Z-AA7Y-01A
60 years, male, white, stage:ii, alive, 1522 days
0.7
TCGA-XF-A8HI-01A
57 years, female, white, stage:iv, dead, 544 days
0.7
TCGA-ZF-AA4W-01A
56 years, male, white, stage:iii, alive, 1830 days
0.7
TCGA-YC-A9TC-01A
72 years, male, white, stage:iv, dead, 20 days
0.7
TCGA-XF-AAN1-01A
75 years, female, stage:iii, dead, 941 days
0.7
TCGA-E7-A4XJ-01A
66 years, male, asian, stage:ii, dead, 68 days
0.7
TCGA-DK-A3IM-01A
77 years, male, white, stage:iii, dead, 248 days
0.7
TCGA-DK-AA76-01A
64 years, female, white, stage:ii, alive, 366 days
0.7
TCGA-G2-A3IB-01A
66 years, male, black or african american, stage:ii, dead, 220 days
0.7
TCGA-XF-A9T6-01A
88 years, female, white, stage:iii, alive, 64 days
0.7
TCGA-4Z-AA81-01A
80 years, male, white, stage:ii, dead, 1270 days
0.6
TCGA-LT-A5Z6-01A
56 years, male, white, stage:ii, alive, 474 days
0.6
TCGA-CF-A3MI-01A
62 years, male, asian, stage:ii, alive, 370 days
0.6
TCGA-BT-A20P-01A
81 years, female, white, stage:iii, dead, 544 days
0.6
TCGA-XF-A9ST-01A
68 years, male, white, stage:iii, dead, 128 days
0.6
TCGA-CU-A3QU-01A
58 years, male, white, stage:iv, alive, 158 days
0.6
TCGA-BT-A42C-01A
64 years, male, white, stage:ii, alive, 873 days
0.6
TCGA-DK-A3IV-01A
60 years, male, white, stage:ii, dead, 294 days
0.6
TCGA-KQ-A41R-01A
80 years, female, white, stage:ii, alive, 1350 days
0.6
TCGA-H4-A2HQ-01A
64 years, female, black or african american, stage:iv, alive, 590 days
0.6
TCGA-S5-AA26-01A
46 years, male, black or african american, stage:iii, alive, 503 days
0.6
TCGA-CF-A47T-01A
58 years, female, asian, stage:ii, dead, 385 days
0.6
TCGA-E7-A4IJ-01A
56 years, male, asian, stage:ii, dead, 674 days
0.6
TCGA-E7-A3Y1-01A
57 years, male, white, stage:ii, alive, 163 days
0.5
TCGA-E7-A519-01A
72 years, male, white, stage:ii, alive, 508 days
0.5
TCGA-PQ-A6FI-01A
70 years, male, white, stage:ii, alive, 372 days
0.5
TCGA-DK-A1A7-01A
67 years, female, white, stage:iv, alive, 560 days
0.5
TCGA-G2-A2EJ-01A
56 years, female, white, stage:ii, alive, 1460 days
0.5
TCGA-ZF-A9R5-01A
59 years, male, white, stage:iii, alive, 1090 days
0.5
TCGA-YF-AA3L-01A
47 years, female, stage:ii, alive, 364 days
0.5
TCGA-G2-A3VY-01A
66 years, male, asian, stage:ii, alive, 536 days
0.5
TCGA-GC-A3RB-01A
54 years, male, white, stage:iii, alive, 582 days
0.5
TCGA-E7-A8O8-01A
59 years, male, asian, stage:ii, alive, 13 days
0.5
TCGA-ZF-A9R7-01A
76 years, female, white, stage:ii, alive, 665 days
0.5
TCGA-FJ-A3ZF-01A
73 years, male, white, stage:iii, alive, 524 days
0.5
TCGA-DK-A1AG-01A
66 years, male, white, stage:iii, alive, 475 days
0.5
TCGA-ZF-AA4T-01A
65 years, male, white, stage:iv, dead, 599 days
0.5
TCGA-CF-A47X-01A
60 years, male, asian, stage:ii, alive, 384 days
0.5
TCGA-HQ-A5ND-01A
78 years, male, stage:iv, dead, 274 days
0.5
TCGA-GC-A4ZW-01A
71 years, male, white, stage:iii, alive, 15 days
0.5
TCGA-DK-A3X2-01A
85 years, male, white, stage:iv, dead, 547 days
0.5
TCGA-LT-A8JT-01A
69 years, female, white, stage:ii, alive, 641 days
0.5
TCGA-GV-A3QK-01B
56 years, female, white, stage:iv, alive, 832 days
0.4
TCGA-YF-AA3M-01A
57 years, male, stage:ii, alive, 415 days
0.4
TCGA-CF-A5UA-01A
67 years, male, asian, stage:ii, alive, 365 days
0.4
TCGA-DK-A3IS-01A
68 years, male, white, stage:ii, alive, 1529 days
0.4
TCGA-FD-A43X-01A
84 years, male, white, stage:ii, alive, 110 days
0.4
TCGA-CF-A9FM-01A
50 years, male, asian, stage:i, alive, 398 days
0.4
TCGA-GD-A6C6-01A
64 years, male, white, stage:iii, alive, 67 days
0.4
TCGA-E7-A7XN-01A
67 years, male, asian, stage:iii, alive, 428 days
0.4
TCGA-ZF-A9RE-01A
78 years, female, white, stage:ii, dead, 106 days
0.4
TCGA-CF-A3MH-01A
75 years, male, asian, stage:ii, alive, 398 days
0.4
TCGA-HQ-A2OE-01A
male, alive, 1174 days
0.4
TCGA-ZF-A9R4-01A
83 years, male, white, stage:ii, alive, 921 days
0.4
TCGA-G2-A3IE-01A
52 years, male, white, stage:ii, dead, 612 days
0.4
TCGA-E7-A7DU-01A
73 years, male, white, stage:iii, alive, 28 days
0.4
TCGA-E5-A2PC-01A
61 years, female, white, stage:iv, alive, 1326 days
0.4
TCGA-DK-AA6U-01A
64 years, male, white, stage:ii, alive, 578 days
0.4
TCGA-CF-A27C-01A
52 years, male, asian, stage:iii, alive, 425 days
0.4
TCGA-FJ-A3ZE-01A
65 years, male, white, stage:iv, dead, 324 days
0.3
TCGA-G2-AA3B-01A
75 years, female, white, stage:ii, alive, 2008 days
0.3
TCGA-GV-A3QH-01A
67 years, male, white, stage:ii, dead, 258 days
0.3
TCGA-DK-A6B6-01A
57 years, male, white, stage:ii, alive, 1115 days
0.3
TCGA-CF-A3MF-01A
34 years, male, asian, stage:iii, alive, 383 days
0.3
TCGA-XF-A8HC-01A
79 years, male, asian, stage:iv, dead, 200 days
0.3
TCGA-DK-AA75-01A
82 years, male, white, stage:iii, dead, 340 days
0.3
TCGA-UY-A9PA-01A
48 years, male, white, stage:iii, alive, 119 days
0.3
TCGA-4Z-AA80-01A
73 years, male, white, stage:ii, dead, 19 days
0.3
TCGA-E7-A7PW-01A
63 years, male, asian, stage:iii, alive, 416 days
0.3
TCGA-CF-A47Y-01A
55 years, male, asian, stage:ii, alive, 373 days
0.3
TCGA-E5-A4TZ-01A
64 years, male, white, stage:iv, dead, 467 days
0.3
TCGA-FD-A6TE-01A
54 years, male, white, stage:iv, alive, 376 days
0.3
TCGA-CF-A8HX-01A
55 years, female, asian, stage:ii, alive, 345 days
0.3
TCGA-CF-A3MG-01A
48 years, male, asian, stage:ii, alive, 369 days
0.3
TCGA-FJ-A3Z9-01A
72 years, male, white, dead, 385 days
0.3
TCGA-G2-AA3D-01A
60 years, male, white, stage:iv, alive, 2139 days
0.3
TCGA-E7-A6MF-01A
37 years, male, asian, stage:ii, alive, 750 days
0.3
TCGA-CF-A47W-01A
42 years, male, asian, stage:ii, alive, 368 days
0.3
TCGA-CF-A8HY-01A
59 years, male, asian, stage:ii, alive, 345 days
0.3
TCGA-XF-AAML-01A
75 years, male, white, stage:ii, dead, 232 days
0.2
TCGA-XF-A8HB-01A
50 years, female, stage:ii, alive, 1370 days
0.2
TCGA-ZF-A9RM-01A
70 years, male, white, stage:ii, alive, 1455 days
0.2
TCGA-ZF-AA4X-01A
56 years, male, white, stage:ii, alive, 2044 days
0.2
TCGA-E5-A4U1-01A
72 years, male, stage:ii, alive, 1181 days
0.2
TCGA-XF-A8HG-01A
69 years, male, white, stage:iii, dead, 467 days
0.2
TCGA-DK-AA6Q-01A
61 years, female, white, stage:iv, dead, 413 days
0.2
TCGA-CF-A5U8-01A
59 years, male, asian, stage:ii, alive, 399 days
0.2
TCGA-ZF-A9R2-01A
75 years, male, white, stage:ii, alive, 642 days
0.2
TCGA-DK-A6B0-01A
61 years, male, white, stage:ii, alive, 2330 days
0.2
TCGA-ZF-AA4U-01A
70 years, male, white, stage:iii, dead, 262 days
0.2
TCGA-E7-A5KF-01A
67 years, male, asian, stage:ii, alive, 20 days
0.2
TCGA-ZF-A9RL-01A
61 years, male, white, stage:ii, alive, 2703 days
0.2
TCGA-GU-A763-01A
72 years, male, white, stage:iii, alive, 997 days
0.1
TCGA-CF-A47S-01A
41 years, male, asian, stage:ii, alive, 333 days
0.1
TCGA-BT-A20V-01A
59 years, female, black or african american, stage:iv, dead, 154 days
0.1
TCGA-KQ-A41O-01A
84 years, male, stage:iv, alive, 1538 days
0.1
TCGA-4Z-AA89-01A
61 years, male, white, stage:iv, alive, 902 days
0.1
TCGA-E7-A678-01A
55 years, male, asian, stage:iii, alive, 798 days
0.1
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UROTHELIAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
The Human Protein Atlas project is funded
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