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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 616.6
Min pTPM: 8.4
Std pTPM: 117.6
Median pTPM: 144.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
616.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
595.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
392.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
391.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
390.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
382.9
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
381.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
372.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
329.7
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
324.5
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
310.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
307.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
293.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
293.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
286.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
284.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
284.3
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
275.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
264.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
261.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
252.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
245.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
243.2
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
234.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
232.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
224.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
224.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
214.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
210.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
209.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
207.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
205.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
201.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
195.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
192.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
191.3
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
191.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
187.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
184.9
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
183.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
181.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
181.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
164.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
162.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
161.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
159.8
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
158.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
155.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
146.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
145.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
143.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
141.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
133.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
130.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
127.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
126.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
120.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
116.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
115.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
111.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
111.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
110.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
110.1
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
106.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
105.5
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
105.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
104.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
100.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
99.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
95.6
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
91.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
89.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
84.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
82.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
82.1
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
81.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
79.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
72.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
69.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
62.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
52.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
50.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
50.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
49.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
48.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
46.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
46.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
45.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
44.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
42.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
42.1
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
39.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
39.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
31.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
30.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
29.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
28.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
23.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
14.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
8.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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