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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 779.8
Min pTPM: 7.7
Std pTPM: 108.4
Median pTPM: 61.0
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
779.8
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
383.0
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
378.1
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
376.7
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
288.7
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
280.7
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
213.2
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
205.1
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
170.1
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
163.8
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
161.8
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
155.7
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
152.8
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
146.5
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
133.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
124.7
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
108.8
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
108.2
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
107.1
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
97.5
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
96.8
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
92.8
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
92.4
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
90.2
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
88.7
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
87.5
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
85.3
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
83.7
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
81.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
79.0
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
78.3
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
77.6
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
75.7
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
73.1
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
71.4
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
70.6
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
69.0
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
68.9
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
68.1
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
65.6
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
65.2
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
64.4
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
63.7
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
62.9
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
59.1
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
57.6
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
56.5
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
54.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
52.2
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
52.0
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
50.6
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
45.3
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
45.2
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
44.7
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
44.0
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
40.5
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
39.2
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
39.1
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
32.6
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
31.4
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
31.4
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
31.1
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
29.5
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
29.0
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
28.3
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
27.6
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
27.4
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
25.7
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
24.5
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
24.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
23.2
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
22.3
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
21.7
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
21.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
21.4
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
20.8
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
20.6
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
20.3
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
19.9
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
17.6
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
15.9
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
15.2
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
13.7
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
13.4
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
13.0
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
11.2
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
8.7
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
7.7
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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