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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 101.0
Min pTPM: 15.0
Std pTPM: 17.3
Median pTPM: 41.2
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
101.0
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
97.3
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
88.8
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
79.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
76.8
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
72.9
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
70.7
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
65.7
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
64.8
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
64.2
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
61.5
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
59.9
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
59.0
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
58.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
57.7
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
57.5
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
57.4
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
57.3
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
54.9
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
53.2
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
53.1
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
52.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
52.6
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
52.0
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
51.3
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
50.2
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
50.1
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
50.1
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
49.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
48.6
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
47.3
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
45.8
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
45.1
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
44.7
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
44.2
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
44.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
43.9
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
43.1
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
42.5
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
42.0
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
41.8
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
41.8
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
41.3
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
41.3
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
41.2
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
41.0
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
40.4
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
39.9
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
39.1
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
38.4
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
37.9
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
37.2
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
36.8
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
36.6
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
36.5
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
36.4
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
36.0
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
35.9
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
35.9
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
34.7
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
34.3
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
33.4
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
32.7
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
32.6
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
32.4
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
31.8
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
30.2
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
29.8
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
29.1
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
28.2
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
27.8
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
27.2
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
25.9
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
25.5
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
25.2
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
24.5
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
24.3
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
24.3
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
23.7
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
23.3
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
23.1
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
22.2
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
22.2
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
21.0
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
17.5
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
16.7
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
15.7
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
15.0
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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