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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA007179
Glial cells
Not detected
Neuronal cells
Medium
Neuronal projections
Not detected
Synapses
Medium
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 266.6
Min pTPM: 1.4
Std pTPM: 53.2
Median pTPM: 54.4
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
266.6
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
248.3
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
205.6
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
203.1
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
197.3
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
185.5
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
183.8
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
171.6
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
164.4
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
155.4
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
138.7
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
136.6
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
136.1
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
132.7
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
128.3
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
122.8
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
120.3
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
114.8
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
114.2
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
111.8
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
107.0
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
103.7
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
101.8
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
101.6
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
101.1
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
100.2
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
99.9
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
99.2
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
98.6
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
96.2
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
95.2
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
93.1
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
91.3
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
90.7
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
89.1
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
86.6
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
86.0
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
84.0
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
83.8
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
82.4
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
82.4
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
81.8
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
81.7
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
81.3
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
79.6
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
79.1
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
78.6
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
69.9
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
69.5
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
69.4
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
68.3
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
68.0
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
64.6
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
63.1
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
63.0
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
61.6
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
61.5
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
59.0
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
58.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
58.2
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
54.8
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
54.4
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
51.9
GTEX-15CHQ-0011-R1a-SM-6EU31
60-69 years, male
48.7
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
48.1
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
48.0
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
47.6
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
47.3
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
46.2
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
45.8
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
44.5
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
43.7
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
42.2
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
41.0
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
40.4
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
39.6
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
39.4
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
39.1
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
38.9
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
36.9
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
36.5
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
33.4
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
32.1
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
31.1
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
31.0
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
30.7
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
30.3
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
28.9
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
28.5
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
28.3
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
28.0
GTEX-14PJM-0011-R1a-SM-6EU2Z
50-59 years, female
27.7
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
27.1
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
26.1
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
25.8
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
24.2
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
23.9
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
23.7
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
23.7
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
23.6
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
23.0
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
20.4
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
19.9
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
16.9
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
16.2
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
15.4
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
15.3
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
15.0
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
15.0
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
14.2
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
11.9
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
11.8
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
10.4
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
10.0
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
9.0
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
7.7
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
7.4
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
7.1
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
4.7
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
4.5
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
3.7
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
2.4
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
1.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.