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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 244.3
Min pTPM: 5.6
Std pTPM: 41.9
Median pTPM: 67.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
244.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
190.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
177.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
165.8
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
146.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
144.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
140.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
137.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
132.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
130.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
128.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
126.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
118.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
113.7
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
112.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
112.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
106.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
106.9
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
103.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
102.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
101.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
101.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
99.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
98.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
92.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
90.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
90.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
90.2
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
88.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
88.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
87.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
86.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
86.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
85.8
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
84.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
83.6
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
83.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
82.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
80.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
80.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
79.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
73.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
73.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
72.7
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
71.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
70.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
70.1
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
68.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
67.9
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
67.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
66.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
66.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
65.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
64.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
63.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
62.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
60.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
59.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
57.3
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
56.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
56.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
56.2
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
54.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
54.3
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
52.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
52.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
51.1
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
50.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
50.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
49.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
49.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
47.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
46.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
46.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
42.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
42.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
37.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
37.6
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
35.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
35.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
34.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
32.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
31.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
31.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
30.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
30.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
30.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
29.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
28.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
27.5
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
26.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
23.6
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
21.0
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
20.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
19.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
17.7
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
15.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
12.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
11.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
5.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.