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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 622.0
Min pTPM: 39.2
Std pTPM: 121.4
Median pTPM: 187.2
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
622.0
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
593.0
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
560.9
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
533.8
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
528.3
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
453.1
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
419.4
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
417.8
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
400.4
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
397.3
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
378.8
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
369.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
367.5
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
367.2
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
360.2
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
355.1
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
341.9
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
341.5
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
340.6
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
337.7
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
337.4
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
334.2
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
330.8
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
316.7
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
315.0
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
311.2
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
309.9
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
304.2
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
300.2
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
276.1
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
275.6
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
275.6
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
272.4
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
265.3
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
258.5
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
252.5
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
252.3
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
244.2
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
244.0
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
241.4
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
239.4
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
239.1
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
236.0
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
234.2
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
232.3
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
230.5
GTEX-15CHQ-0011-R1a-SM-6EU31
60-69 years, male
224.7
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
222.2
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
220.8
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
220.2
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
218.9
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
216.9
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
216.1
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
215.5
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
212.9
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
209.0
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
201.9
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
200.8
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
194.1
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
192.6
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
190.9
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
187.2
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
182.8
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
182.6
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
182.2
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
181.3
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
180.4
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
170.1
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
166.1
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
165.6
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
163.4
GTEX-14PJM-0011-R1a-SM-6EU2Z
50-59 years, female
156.5
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
154.8
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
154.7
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
153.3
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
153.2
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
145.9
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
145.7
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
145.4
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
143.4
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
141.3
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
140.8
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
137.8
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
135.3
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
129.6
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
129.3
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
128.9
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
126.7
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
123.4
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
121.9
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
119.1
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
118.5
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
118.1
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
117.8
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
117.7
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
115.7
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
111.6
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
110.5
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
110.4
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
107.9
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
107.8
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
107.1
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
103.5
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
100.5
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
100.0
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
97.9
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
94.3
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
91.7
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
91.1
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
90.9
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
90.4
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
86.2
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
84.6
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
80.3
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
80.2
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
79.0
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
65.0
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
58.7
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
57.5
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
47.9
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
46.5
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
44.8
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
39.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.