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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 506.4
Min pTPM: 5.8
Std pTPM: 91.1
Median pTPM: 71.2
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
506.4
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
309.5
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
298.7
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
296.8
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
294.1
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
242.2
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
241.0
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
225.1
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
219.4
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
213.8
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
213.0
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
211.7
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
200.5
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
198.4
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
189.8
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
183.1
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
178.9
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
175.1
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
161.4
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
161.2
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
151.5
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
150.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
150.1
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
143.9
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
142.6
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
137.7
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
134.5
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
124.2
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
123.2
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
106.0
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
105.8
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
105.6
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
102.9
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
96.8
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
88.5
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
82.7
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
80.8
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
79.7
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
79.6
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
79.4
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
78.2
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
76.7
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
74.4
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
71.7
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
70.7
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
69.9
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
65.3
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
59.1
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
57.5
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
50.8
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
50.3
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
49.8
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
45.4
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
44.0
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
43.0
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
40.8
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
40.3
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
39.4
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
34.5
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
33.0
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
32.4
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
32.2
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
30.8
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
29.3
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
27.9
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
27.4
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
27.1
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
26.9
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
24.5
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
23.0
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
22.6
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
22.4
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
20.9
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
20.3
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
20.1
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
19.5
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
18.7
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
16.8
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
16.1
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
14.4
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
12.3
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
12.1
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
12.0
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
11.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
10.1
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
9.9
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
9.2
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
5.8
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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