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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 905.6
Min pTPM: 13.0
Std pTPM: 170.3
Median pTPM: 235.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
905.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
723.4
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
591.6
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
590.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
571.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
568.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
562.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
557.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
513.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
507.3
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
501.9
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
494.8
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
491.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
490.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
459.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
456.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
431.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
429.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
428.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
421.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
420.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
412.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
408.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
401.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
394.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
393.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
391.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
378.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
378.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
374.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
373.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
358.6
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
345.7
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
334.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
326.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
313.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
299.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
286.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
285.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
285.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
281.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
280.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
261.4
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
260.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
260.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
246.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
242.0
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
240.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
240.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
238.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
231.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
228.0
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
227.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
224.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
223.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
222.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
213.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
210.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
210.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
209.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
206.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
203.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
197.1
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
194.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
189.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
188.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
185.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
182.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
181.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
180.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
171.5
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
153.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
153.4
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
148.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
147.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
139.3
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
132.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
125.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
125.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
115.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
112.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
103.1
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
100.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
98.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
98.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
97.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
86.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
85.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
85.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
79.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
79.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
70.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
67.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
64.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
62.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
46.2
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
41.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
38.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
17.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
13.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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