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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 302.5
Min pTPM: 14.4
Std pTPM: 57.6
Median pTPM: 139.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
302.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
263.1
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
237.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
222.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
220.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
219.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
213.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
205.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
204.9
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
200.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
199.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
198.4
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
194.6
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
192.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
190.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
190.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
185.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
185.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
183.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
181.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
181.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
179.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
175.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
173.6
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
171.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
171.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
170.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
167.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
166.2
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
165.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
161.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
161.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
160.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
158.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
158.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
156.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
155.4
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
154.1
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
153.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
151.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
148.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
147.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
145.5
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
145.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
144.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
144.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
143.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
143.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
142.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
140.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
138.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
131.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
131.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
130.2
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
128.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
128.0
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
123.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
123.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
122.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
120.9
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
120.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
118.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
113.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
113.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
110.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
110.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
109.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
107.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
103.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
102.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
98.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
96.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
93.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
91.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
87.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
86.3
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
79.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
77.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
76.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
75.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
75.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
74.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
69.9
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
63.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
62.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
58.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
57.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
57.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
53.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
53.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
50.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
48.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
46.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
40.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
37.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
35.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
29.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
26.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
20.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
14.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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