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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 158.1
Min pTPM: 3.5
Std pTPM: 31.7
Median pTPM: 55.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
158.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
125.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
123.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
122.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
120.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
111.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
110.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
107.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
106.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
105.6
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
104.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
102.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
101.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
101.3
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
98.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
97.8
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
93.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
93.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
92.1
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
91.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
90.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
86.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
85.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
85.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
84.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
84.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
81.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
80.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
79.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
77.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
75.1
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
72.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
72.1
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
72.1
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
69.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
68.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
68.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
67.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
64.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
64.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
64.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
61.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
60.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
60.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
59.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
59.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
59.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
58.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
57.8
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
55.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
55.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
53.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
50.8
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
49.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
47.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
46.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
46.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
46.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
45.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
45.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
44.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
44.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
44.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
43.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
42.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
42.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
42.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
41.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
41.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
41.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
40.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
39.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
39.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
38.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
38.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
37.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
36.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
33.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
33.2
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
32.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
31.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
29.5
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
29.5
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
27.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
27.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
26.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
24.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
22.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
21.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
21.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
20.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
19.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
16.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
16.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
15.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
15.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
12.0
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
11.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
8.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
3.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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