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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 525.6
Min pTPM: 17.4
Std pTPM: 133.1
Median pTPM: 220.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
525.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
512.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
504.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
504.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
493.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
480.7
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
480.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
480.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
478.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
444.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
444.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
440.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
430.4
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
423.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
409.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
400.6
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
389.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
383.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
378.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
377.0
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
366.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
366.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
346.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
338.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
336.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
335.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
333.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
329.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
329.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
317.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
316.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
313.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
309.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
308.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
302.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
298.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
284.7
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
277.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
276.3
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
274.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
270.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
268.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
252.5
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
238.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
237.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
233.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
233.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
231.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
230.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
222.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
218.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
217.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
209.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
206.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
204.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
195.5
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
194.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
194.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
194.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
186.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
184.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
175.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
173.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
170.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
162.8
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
162.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
162.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
158.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
149.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
145.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
144.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
143.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
138.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
137.9
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
124.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
122.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
121.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
113.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
112.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
112.2
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
110.5
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
106.7
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
106.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
104.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
102.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
98.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
97.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
96.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
90.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
87.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
81.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
81.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
80.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
73.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
68.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
65.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
64.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
63.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
30.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
17.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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