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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 2021.3
Min pTPM: 104.8
Std pTPM: 313.6
Median pTPM: 581.3
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
2021.3
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
1781.6
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
1400.0
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
987.1
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
967.4
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
961.5
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
952.1
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
946.2
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
917.6
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
908.1
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
897.4
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
884.5
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
884.4
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
881.0
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
880.7
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
878.2
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
854.8
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
840.2
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
838.7
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
819.4
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
779.6
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
768.8
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
756.9
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
753.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
742.8
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
727.3
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
718.6
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
713.4
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
707.5
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
702.7
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
698.4
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
671.2
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
657.9
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
653.5
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
651.6
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
643.0
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
635.3
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
632.1
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
620.8
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
620.0
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
600.6
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
599.0
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
593.6
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
583.7
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
578.9
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
564.3
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
563.0
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
562.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
557.6
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
552.0
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
547.2
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
531.3
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
523.4
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
511.3
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
504.7
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
501.2
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
492.7
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
488.1
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
484.6
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
474.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
465.7
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
441.5
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
441.2
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
423.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
400.2
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
388.7
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
379.3
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
367.9
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
365.3
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
351.7
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
342.0
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
339.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
328.9
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
326.4
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
285.9
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
284.4
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
283.3
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
273.4
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
245.1
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
242.2
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
238.8
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
236.0
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
226.1
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
207.2
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
183.4
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
159.1
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
153.1
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
104.8
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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