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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 889.3
Min pTPM: 23.2
Std pTPM: 166.7
Median pTPM: 135.3
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
889.3
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
860.2
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
599.1
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
526.6
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
505.8
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
504.2
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
482.0
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
452.7
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
434.6
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
367.8
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
352.0
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
348.8
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
345.6
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
338.7
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
296.0
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
293.3
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
249.9
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
249.8
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
241.1
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
231.7
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
230.8
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
218.0
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
206.4
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
205.3
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
205.0
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
199.7
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
198.3
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
193.3
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
192.3
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
190.9
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
187.2
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
186.6
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
186.1
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
184.8
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
183.2
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
176.8
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
172.1
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
170.8
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
168.6
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
163.0
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
142.4
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
141.9
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
139.9
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
137.7
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
132.9
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
132.8
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
122.7
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
118.5
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
118.2
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
115.7
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
111.5
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
110.6
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
110.1
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
108.3
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
107.9
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
105.4
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
103.9
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
90.9
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
83.1
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
83.0
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
80.9
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
77.8
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
73.8
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
73.5
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
71.5
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
66.6
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
64.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
64.0
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
63.6
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
61.0
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
57.0
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
55.8
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
54.5
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
53.0
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
53.0
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
52.1
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
50.5
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
48.0
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
45.3
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
45.0
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
44.0
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
38.6
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
37.1
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
35.4
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
33.8
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
27.5
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
27.5
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
23.2
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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