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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 139.1
Min pTPM: 7.9
Std pTPM: 21.3
Median pTPM: 36.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
139.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
98.8
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
96.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
87.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
86.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
75.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
75.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
74.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
70.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
70.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
68.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
68.1
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
65.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
65.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
62.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
62.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
61.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
60.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
59.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
59.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
57.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
53.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
53.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
51.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
51.1
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
50.1
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
49.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
49.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
48.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
48.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
47.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
47.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
46.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
46.7
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
44.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
43.5
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
43.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
42.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
41.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
41.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
41.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
40.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
39.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
39.1
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
38.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
38.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
38.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
37.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
37.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
36.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
36.5
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
35.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
34.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
34.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
34.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
33.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
33.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
33.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
33.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
33.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
32.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
31.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
31.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
31.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
30.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
30.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
30.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
30.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
29.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
29.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
29.7
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
29.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
28.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
28.8
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
28.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
28.6
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
28.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
27.9
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
27.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
25.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
23.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
23.8
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
23.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
23.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
22.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
21.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
21.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
20.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
20.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
19.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
19.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
18.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
18.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
18.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
17.1
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
16.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
15.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
9.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
8.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
7.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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