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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 355.5
Min pTPM: 28.1
Std pTPM: 70.8
Median pTPM: 114.7
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
355.5
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
349.2
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
316.8
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
313.8
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
302.3
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
300.7
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
288.0
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
252.0
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
248.0
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
244.7
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
244.3
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
238.0
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
211.0
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
207.3
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
203.2
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
197.8
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
196.8
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
194.5
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
191.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
190.6
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
190.5
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
188.7
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
188.3
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
182.3
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
180.6
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
180.3
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
179.3
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
170.0
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
169.5
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
169.4
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
169.0
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
166.7
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
166.7
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
160.8
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
159.9
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
158.3
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
154.5
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
152.2
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
151.3
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
151.2
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
151.1
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
147.0
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
141.9
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
140.4
GTEX-15CHQ-0011-R1a-SM-6EU31
60-69 years, male
137.9
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
137.1
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
136.3
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
134.5
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
131.9
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
131.2
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
128.3
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
127.7
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
127.4
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
123.7
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
123.7
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
123.4
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
122.4
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
122.1
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
119.9
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
119.8
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
116.8
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
114.7
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
113.5
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
111.1
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
110.7
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
110.0
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
109.3
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
107.9
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
107.6
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
107.3
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
106.1
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
104.5
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
103.3
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
100.6
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
100.4
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
97.3
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
96.6
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
96.3
GTEX-14PJM-0011-R1a-SM-6EU2Z
50-59 years, female
96.1
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
94.2
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
92.5
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
91.1
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
90.3
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
83.7
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
83.6
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
81.3
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
81.3
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
80.6
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
80.5
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
79.2
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
77.0
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
76.9
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
72.9
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
71.3
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
71.1
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
69.8
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
66.9
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
66.5
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
65.7
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
64.6
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
63.8
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
63.1
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
62.1
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
61.2
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
59.3
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
56.2
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
55.8
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
54.2
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
53.0
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
51.6
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
49.6
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
49.2
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
48.2
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
47.5
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
47.2
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
43.5
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
42.4
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
40.2
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
37.5
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
36.0
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
35.8
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
32.2
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
28.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.