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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 133.4
Min pTPM: 3.7
Std pTPM: 21.5
Median pTPM: 21.4
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
133.4
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
125.6
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
69.2
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
65.0
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
59.5
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
59.5
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
54.2
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
53.8
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
51.2
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
49.2
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
49.2
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
44.7
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
43.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
43.5
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
41.7
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
41.4
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
40.9
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
38.9
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
37.5
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
33.1
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
32.7
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
32.6
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
32.6
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
32.2
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
32.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
31.3
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
30.7
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
30.1
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
29.5
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
29.3
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
28.8
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
28.8
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
28.5
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
27.8
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
27.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
26.6
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
26.1
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
25.9
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
25.8
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
23.6
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
23.5
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
22.8
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
22.5
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
21.9
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
20.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
20.5
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
20.5
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
20.4
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
20.3
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
19.8
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
19.7
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
18.6
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
18.6
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
18.3
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
17.1
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
16.3
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
16.3
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
16.2
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
15.5
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
15.1
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
14.8
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
14.6
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
14.0
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
13.9
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
13.7
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
12.4
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
12.3
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
12.3
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
12.1
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
11.1
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
11.0
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
10.9
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
10.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
10.2
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
10.0
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
9.9
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
9.6
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
9.5
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
9.1
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
9.0
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
7.9
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
7.8
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
7.8
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
6.7
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
6.2
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
5.6
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
5.1
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
3.7
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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