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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 142.5
Min pTPM: 15.4
Std pTPM: 32.8
Median pTPM: 78.3
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
142.5
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
141.4
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
140.2
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
140.1
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
138.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
136.8
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
131.5
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
131.0
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
130.2
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
129.2
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
128.5
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
123.3
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
119.9
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
119.4
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
114.9
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
114.5
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
113.5
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
111.6
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
110.8
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
110.5
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
105.6
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
104.6
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
104.2
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
104.0
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
103.3
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
103.1
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
94.4
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
94.0
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
92.6
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
92.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
91.5
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
91.5
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
91.4
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
90.2
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
89.6
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
86.2
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
85.4
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
85.1
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
84.8
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
84.3
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
84.2
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
80.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
80.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
80.3
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
76.3
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
75.7
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
75.6
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
74.4
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
74.3
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
70.3
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
69.3
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
67.5
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
66.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
66.4
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
65.4
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
64.4
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
63.2
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
62.5
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
61.2
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
59.3
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
59.0
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
59.0
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
56.0
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
55.6
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
55.6
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
55.5
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
54.1
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
53.8
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
53.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
48.3
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
48.1
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
48.1
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
47.9
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
44.9
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
43.3
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
43.0
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
42.9
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
40.3
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
40.2
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
39.0
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
35.7
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
34.4
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
32.1
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
30.7
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
26.5
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
23.0
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
21.8
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
15.4
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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