We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 757.8
Min pTPM: 8.5
Std pTPM: 108.7
Median pTPM: 64.8
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
757.8
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
597.0
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
333.5
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
267.3
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
210.0
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
208.4
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
190.3
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
186.7
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
186.0
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
185.2
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
184.2
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
167.5
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
162.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
155.6
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
152.8
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
152.1
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
147.7
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
147.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
146.0
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
132.9
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
120.2
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
117.7
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
109.7
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
109.7
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
106.8
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
104.2
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
102.1
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
101.8
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
96.6
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
91.5
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
87.8
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
87.6
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
87.6
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
82.3
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
80.2
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
78.7
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
74.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
74.6
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
74.0
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
71.2
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
68.4
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
66.2
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
66.1
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
65.5
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
64.1
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
63.6
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
62.0
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
61.1
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
59.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
58.5
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
57.6
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
57.4
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
50.6
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
47.3
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
45.5
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
45.3
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
45.2
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
44.8
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
44.2
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
42.4
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
42.4
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
40.3
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
38.4
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
37.4
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
37.4
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
36.9
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
34.7
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
33.3
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
31.9
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
31.7
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
30.6
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
28.0
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
27.7
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
27.1
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
27.1
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
27.1
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
26.3
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
26.3
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
26.1
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
24.6
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
23.3
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
21.2
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
19.1
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
18.9
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
18.5
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
18.3
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
11.5
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
8.5
Show allShow less
MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
MENU
