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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 166.6
Min pTPM: 4.5
Std pTPM: 34.7
Median pTPM: 64.3
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
166.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
161.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
130.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
130.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
129.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
126.1
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
120.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
113.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
111.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
109.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
108.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
108.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
106.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
105.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
104.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
103.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
103.0
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
99.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
98.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
98.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
96.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
95.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
95.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
94.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
93.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
93.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
92.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
90.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
89.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
88.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
87.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
86.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
85.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
85.3
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
84.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
79.2
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
76.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
75.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
73.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
73.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
72.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
69.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
69.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
68.8
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
68.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
67.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
66.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
65.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
65.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
65.1
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
63.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
63.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
63.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
63.0
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
62.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
62.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
61.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
61.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
60.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
58.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
57.7
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
56.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
54.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
52.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
52.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
49.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
49.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
47.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
46.3
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
45.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
43.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
40.7
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
40.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
39.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
37.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
37.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
37.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
35.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
31.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
30.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
28.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
28.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
28.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
27.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
26.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
26.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
24.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
23.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
22.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
22.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
21.5
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
20.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
19.5
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
19.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
18.7
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
15.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
15.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
15.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
11.5
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
4.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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