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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 227.7
Min pTPM: 15.9
Std pTPM: 37.6
Median pTPM: 56.5
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
227.7
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
205.4
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
178.0
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
125.4
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
121.0
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
120.4
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
118.3
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
117.3
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
113.6
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
108.1
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
97.2
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
91.2
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
90.7
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
89.0
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
86.8
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
84.7
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
84.3
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
82.9
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
81.7
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
81.3
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
80.0
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
78.6
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
77.5
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
74.7
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
74.5
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
73.8
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
70.6
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
68.0
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
67.9
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
67.6
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
67.1
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
65.7
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
65.0
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
62.4
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
62.2
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
61.8
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
60.7
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
60.6
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
60.2
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
58.5
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
57.9
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
57.2
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
57.2
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
57.1
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
55.9
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
55.6
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
53.6
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
53.2
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
52.6
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
52.3
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
52.1
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
50.1
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
50.0
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
49.6
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
49.2
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
46.9
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
46.6
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
44.6
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
44.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
44.4
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
41.0
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
40.8
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
39.3
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
39.0
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
39.0
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
37.4
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
35.5
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
34.8
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
34.5
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
33.0
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
32.3
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
32.3
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
31.7
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
31.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
30.7
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
30.5
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
30.3
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
28.3
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
27.7
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
26.5
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
24.2
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
22.8
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
21.6
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
20.7
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
19.8
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
18.0
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
16.8
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
15.9
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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