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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 372.3
Min pTPM: 18.6
Std pTPM: 62.3
Median pTPM: 107.3
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
372.3
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
359.9
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
298.2
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
255.9
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
243.7
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
241.3
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
234.7
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
228.2
GTEX-15CHQ-0011-R1a-SM-6EU31
60-69 years, male
221.8
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
218.8
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
205.3
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
194.1
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
190.0
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
188.3
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
186.3
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
178.6
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
177.8
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
177.6
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
175.6
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
173.5
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
170.7
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
164.5
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
162.7
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
158.1
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
157.3
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
155.4
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
154.4
GTEX-14PJM-0011-R1a-SM-6EU2Z
50-59 years, female
153.5
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
153.2
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
148.4
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
147.4
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
145.2
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
144.8
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
144.6
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
143.5
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
142.3
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
140.1
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
136.5
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
135.3
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
132.4
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
132.0
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
131.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
130.6
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
130.3
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
130.0
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
128.9
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
127.6
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
125.4
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
122.5
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
119.1
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
118.2
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
117.6
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
116.7
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
116.6
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
116.5
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
114.8
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
113.9
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
112.7
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
109.3
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
109.0
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
108.4
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
107.3
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
107.3
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
105.9
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
104.5
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
102.5
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
98.5
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
97.8
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
97.7
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
97.6
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
97.5
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
96.9
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
96.8
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
96.1
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
96.0
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
92.6
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
90.6
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
89.4
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
89.2
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
88.7
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
86.7
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
84.7
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
83.6
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
83.0
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
82.5
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
82.4
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
81.6
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
81.3
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
79.3
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
77.5
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
77.4
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
75.7
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
74.8
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
72.1
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
69.5
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
68.9
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
67.9
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
67.5
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
66.1
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
65.6
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
64.4
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
64.3
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
63.0
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
62.7
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
62.6
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
61.9
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
61.3
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
59.0
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
56.0
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
53.9
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
53.8
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
52.0
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
51.2
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
48.9
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
40.1
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
39.9
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
39.8
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
39.5
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
38.4
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
38.2
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
30.8
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
28.5
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
18.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.