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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 529.4
Min pTPM: 0.7
Std pTPM: 92.3
Median pTPM: 42.5
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
529.4
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
523.6
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
238.9
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
237.3
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
224.3
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
207.0
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
191.8
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
179.6
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
177.5
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
172.7
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
163.9
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
145.1
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
139.6
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
138.0
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
132.4
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
122.1
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
115.9
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
114.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
106.8
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
102.5
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
91.8
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
87.1
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
85.5
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
85.4
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
81.0
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
79.2
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
78.9
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
72.7
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
70.0
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
69.5
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
67.8
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
64.5
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
64.3
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
63.8
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
63.1
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
62.7
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
56.8
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
56.5
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
55.3
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
55.0
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
52.4
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
48.4
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
47.2
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
42.7
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
42.3
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
39.5
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
36.9
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
36.7
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
33.5
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
31.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
29.7
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
29.2
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
27.6
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
25.2
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
20.8
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
18.7
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
18.0
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
15.0
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
14.6
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
14.2
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
13.7
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
12.4
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
12.0
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
11.5
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
11.4
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
11.3
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
9.7
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
8.7
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
8.0
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
7.8
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
7.7
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
7.3
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
7.2
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
5.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
5.7
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
4.7
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
4.7
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
4.7
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
4.4
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
3.4
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
3.2
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
3.0
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
2.6
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
2.3
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
2.2
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
1.6
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
1.3
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
0.7
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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