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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 605.5
Min pTPM: 7.1
Std pTPM: 119.7
Median pTPM: 172.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
605.5
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
478.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
466.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
416.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
402.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
397.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
396.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
376.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
359.7
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
356.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
349.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
346.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
343.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
335.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
314.1
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
307.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
306.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
305.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
298.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
297.9
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
293.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
285.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
273.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
270.4
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
268.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
264.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
263.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
261.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
260.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
256.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
248.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
239.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
238.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
232.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
228.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
226.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
221.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
207.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
206.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
205.5
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
202.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
201.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
200.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
192.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
191.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
187.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
182.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
177.1
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
176.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
173.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
172.3
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
172.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
169.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
167.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
162.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
159.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
158.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
158.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
156.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
146.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
145.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
142.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
139.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
135.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
134.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
125.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
120.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
120.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
113.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
105.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
102.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
99.4
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
97.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
92.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
90.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
89.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
85.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
83.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
80.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
78.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
76.9
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
75.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
71.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
66.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
65.1
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
61.3
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
61.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
52.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
43.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
42.7
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
42.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
41.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
41.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
40.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
35.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
32.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
29.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
16.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
9.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
7.1
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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