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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 1332.4
Min pTPM: 19.6
Std pTPM: 308.5
Median pTPM: 238.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
1332.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
1302.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
1249.4
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
1154.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
1018.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
1005.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
918.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
870.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
808.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
749.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
734.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
710.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
654.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
653.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
648.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
637.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
624.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
623.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
616.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
578.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
570.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
561.9
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
561.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
543.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
533.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
520.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
520.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
493.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
456.4
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
445.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
412.6
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
395.2
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
391.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
376.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
375.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
372.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
371.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
354.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
340.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
339.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
337.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
335.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
331.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
327.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
315.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
275.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
268.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
244.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
243.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
239.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
238.7
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
231.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
229.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
229.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
199.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
188.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
181.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
181.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
173.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
173.2
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
165.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
164.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
160.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
159.9
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
153.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
148.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
148.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
145.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
139.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
137.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
133.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
129.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
121.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
110.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
99.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
99.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
95.0
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
78.2
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
74.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
74.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
71.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
69.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
64.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
61.5
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
56.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
53.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
52.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
49.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
48.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
46.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
45.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
43.1
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
42.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
42.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
40.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
35.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
31.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
27.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
25.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
19.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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