We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Spinal cord (cervical c-1) Average pTPM: 3871.6
Samples: 91
Max pTPM: 7166.4
Min pTPM: 1354.3
Std pTPM: 1104.7
Median pTPM: 3961.9
GTEX-1A8G7-0011-R9b-SM-7IGQH
60-69 years, male
7166.4
GTEX-15CHQ-0011-R9a-SM-6LLHX
60-69 years, male
6887.8
GTEX-T5JC-0011-R9A-SM-32PLV
20-29 years, male
6454.5
GTEX-NPJ8-0011-R9a-SM-2YUN5
40-49 years, male
6160.1
GTEX-131YS-0011-R9b-SM-5EQLY
60-69 years, female
5920.1
GTEX-ZAB4-0011-R9a-SM-4SOKG
40-49 years, male
5892.5
GTEX-XMD1-0011-R9A-SM-4AT49
60-69 years, male
5595.9
GTEX-15DCD-0011-R9b-SM-7KUED
70-79 years, female
5587.7
GTEX-QVUS-0011-R9A-SM-3GIJA
60-69 years, female
5348.5
GTEX-14ABY-0011-R9a-SM-5PNZK
50-59 years, male
5194.6
GTEX-14E7W-0011-R9a-SM-62LE6
70-79 years, male
5147.7
GTEX-13OW5-0011-R9b-SM-5O9CL
60-69 years, male
5016.6
GTEX-139UW-0011-R9b-SM-5LZYT
60-69 years, male
4919.0
GTEX-16XZZ-0011-R9b-SM-7DHKX
60-69 years, male
4814.3
GTEX-14BIL-0011-R9a-SM-5SI7A
50-59 years, male
4791.1
GTEX-13RTJ-0011-R9a-SM-5Q5AY
60-69 years, male
4749.7
GTEX-ZE9C-0011-R9a-SM-4WWCY
60-69 years, male
4612.0
GTEX-NPJ7-0011-R9a-SM-2TC5R
60-69 years, female
4601.5
GTEX-RNOR-0011-R9A-SM-2TF52
50-59 years, female
4518.6
GTEX-13N2G-0011-R9b-SM-5MR4E
60-69 years, male
4496.2
GTEX-18464-0011-R9a-SM-731BK
50-59 years, male
4416.2
GTEX-16Z82-0011-R9a-SM-7DUFA
60-69 years, male
4385.6
GTEX-14BIM-0011-R9a-SM-6LLJL
60-69 years, female
4361.7
GTEX-OHPN-0011-R9A-SM-5TDEJ
60-69 years, female
4353.2
GTEX-QDT8-0011-R9A-SM-5SI8J
30-39 years, female
4353.0
GTEX-14PJO-0011-R9b-SM-62LE9
60-69 years, male
4332.1
GTEX-12126-0011-R9b-SM-5BC6P
20-29 years, male
4317.0
GTEX-13PLJ-0011-R9b-SM-5O9DV
60-69 years, female
4312.8
GTEX-15DYW-0011-R9b-SM-6PALB
60-69 years, female
4305.0
GTEX-13NYS-0011-R9b-SM-5MR44
60-69 years, male
4267.8
GTEX-131XW-0011-R9a-SM-5N9EO
50-59 years, female
4262.4
GTEX-1B933-0011-R9a-SM-79OOR
50-59 years, female
4260.6
GTEX-15ER7-0011-R9b-SM-6PALF
20-29 years, female
4238.0
GTEX-17EVQ-0011-R9b-SM-79OJY
70-79 years, male
4217.6
GTEX-WL46-0011-R9A-SM-3MJFP
50-59 years, male
4180.9
GTEX-YJ89-0011-R9a-SM-4SOK7
60-69 years, male
4174.7
GTEX-ZF28-0011-R9a-SM-4WWDY
60-69 years, male
4144.5
GTEX-ZVZQ-0011-R9a-SM-51MRH
60-69 years, female
4128.5
GTEX-147GR-0011-R9a-SM-5S2UY
60-69 years, male
4034.4
GTEX-QVJO-0011-R9A-SM-2S1QH
60-69 years, female
4009.0
GTEX-14JIY-0011-R9a-SM-6EU34
60-69 years, male
4003.4
GTEX-14PJM-0011-R9b-SM-6EU35
50-59 years, female
4002.9
GTEX-15EO6-0011-R9a-SM-6PALG
50-59 years, male
3989.0
GTEX-139T4-0011-R9b-SM-5HL6S
50-59 years, female
3973.8
GTEX-13JUV-0011-R9a-SM-5LZX3
40-49 years, female
3971.8
GTEX-12WSH-0011-R9b-SM-5LZUG
50-59 years, male
3961.9
GTEX-X4EP-0011-R9B-SM-4QASI
60-69 years, female
3961.9
GTEX-13N1W-0011-R9b-SM-5MR4R
70-79 years, male
3874.6
GTEX-13VXU-0011-R9b-SM-5SI73
50-59 years, male
3819.5
GTEX-13NZA-0011-R9b-SM-5MR5I
60-69 years, male
3819.0
GTEX-145LU-0011-R9b-SM-5SI66
50-59 years, male
3807.4
GTEX-14BMV-0011-R9b-SM-5ZZUA
50-59 years, male
3795.9
GTEX-14PN4-0011-R9a-SM-6LLH9
50-59 years, male
3762.4
GTEX-YFC4-0011-R9a-SM-4SOK4
40-49 years, female
3687.0
GTEX-15G19-0011-R9b-SM-7KUEE
60-69 years, male
3679.2
GTEX-11ZUS-0011-R9b-SM-5BC76
30-39 years, male
3663.6
GTEX-14E6C-0011-R9a-SM-6EU33
40-49 years, male
3496.7
GTEX-NL4W-0011-R9a-SM-2I3G1
50-59 years, male
3468.4
GTEX-13FXS-0011-R9a-SM-5K7UI
50-59 years, male
3446.2
GTEX-R55E-0011-R9A-SM-2TC6C
20-29 years, male
3418.5
GTEX-1BAJH-0011-R9b-SM-7EPIQ
70-79 years, male
3406.8
GTEX-T6MN-0011-R9A-SM-32QOZ
50-59 years, male
3339.8
GTEX-12WSD-0011-R9a-SM-5GU6W
60-69 years, female
3338.7
GTEX-13SLX-0011-R9b-SM-5SI6X
50-59 years, female
3297.6
GTEX-13FTY-0011-R9b-SM-5KM2U
40-49 years, female
3106.4
GTEX-13NYB-0011-R9b-SM-5MR5P
40-49 years, male
3083.7
GTEX-13OVJ-0011-R9b-SM-5L3GD
50-59 years, female
3034.1
GTEX-13CZV-0011-R9a-SM-5LZXT
60-69 years, male
3028.9
GTEX-11WQK-0011-R9b-SM-5BC6N
50-59 years, male
3017.1
GTEX-OXRO-0011-R9A-SM-3NB1X
60-69 years, female
2986.8
GTEX-11ZVC-0011-R9a-SM-57WC5
50-59 years, female
2893.1
GTEX-13QJC-0011-R9b-SM-5PNX3
60-69 years, female
2811.2
GTEX-TSE9-0011-R9A-SM-3DB7Q
60-69 years, female
2802.0
GTEX-RU72-0011-R9A-SM-2TF67
50-59 years, female
2786.3
GTEX-13OVL-0011-R9a-SM-5P9GX
50-59 years, male
2748.7
GTEX-13CIG-0011-R9a-SM-5K7VU
50-59 years, male
2697.9
GTEX-148VJ-0011-R9b-SM-5SI77
70-79 years, male
2666.4
GTEX-13PVQ-0011-R9b-SM-5LU3B
50-59 years, male
2656.1
GTEX-XLM4-0011-R9A-SM-4AT45
60-69 years, male
2652.7
GTEX-16NPV-0011-R9b-SM-79ONF
50-59 years, female
2647.8
GTEX-12WSC-0011-R9a-SM-5GU4U
50-59 years, male
2636.2
GTEX-14BIN-0011-R9a-SM-5SI76
50-59 years, female
2632.9
GTEX-13SLW-0011-R9a-SM-5O9BT
70-79 years, male
2567.5
GTEX-13S7M-0011-R9a-SM-5O9DW
60-69 years, female
2468.1
GTEX-Q2AG-0011-R9A-SM-2HMJ6
40-49 years, female
2420.9
GTEX-11GSP-0011-R9b-SM-5NQ77
60-69 years, female
2382.8
GTEX-13X6I-0011-R9b-SM-5PNZJ
60-69 years, male
2341.6
GTEX-11ONC-0011-R9b-SM-5NQ8J
60-69 years, male
2125.3
GTEX-13PL6-0011-R9b-SM-5O9CH
40-49 years, female
2019.7
GTEX-13FLV-0011-R9b-SM-5L3DA
50-59 years, male
1831.5
GTEX-13O1R-0011-R9b-SM-5KM33
60-69 years, male
1354.3
Show allShow less
SPINAL CORD - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.