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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 3432.7
Min pTPM: 148.8
Std pTPM: 397.0
Median pTPM: 557.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
3432.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
1708.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
1478.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
1412.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
1326.2
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
1228.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
1207.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
1122.0
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
1120.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
1057.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
992.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
987.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
979.8
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
949.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
937.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
875.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
872.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
856.6
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
839.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
836.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
808.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
787.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
779.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
775.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
756.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
750.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
744.1
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
744.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
738.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
736.6
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
728.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
720.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
703.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
693.8
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
680.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
679.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
663.5
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
652.6
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
632.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
632.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
628.3
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
602.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
579.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
579.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
578.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
576.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
570.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
568.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
567.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
560.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
554.4
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
542.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
534.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
530.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
530.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
528.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
528.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
519.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
519.9
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
515.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
513.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
513.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
509.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
506.2
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
504.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
502.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
485.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
480.0
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
475.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
468.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
466.1
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
454.8
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
452.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
451.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
451.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
445.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
441.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
440.1
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
438.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
438.3
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
427.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
419.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
411.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
400.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
392.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
386.5
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
377.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
372.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
361.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
351.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
348.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
343.3
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
308.2
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
305.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
295.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
271.1
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
228.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
200.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
199.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
148.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.