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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 4958.2
Min pTPM: 415.9
Std pTPM: 875.2
Median pTPM: 1687.2
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
4958.2
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
4382.4
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
4297.7
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
4215.6
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
3837.2
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
3447.1
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
3425.5
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
3225.1
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
3049.5
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
2741.8
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
2529.0
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
2503.2
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
2502.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
2473.0
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
2472.7
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
2420.0
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
2403.9
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
2397.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
2354.8
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
2300.4
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
2292.5
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
2259.8
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
2170.5
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
2161.7
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
2058.7
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
2053.1
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
2051.3
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
2021.8
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
2006.1
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
1996.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
1939.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
1938.9
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
1925.1
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
1878.1
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
1865.7
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
1843.3
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
1804.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
1803.8
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
1781.3
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
1776.2
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
1756.9
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
1734.5
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
1723.1
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
1689.2
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
1685.2
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
1674.0
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
1673.2
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
1619.1
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
1613.7
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
1600.8
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
1592.0
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
1583.1
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
1581.4
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
1572.6
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
1542.4
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
1501.9
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
1492.9
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
1490.3
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
1468.7
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
1434.0
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
1424.4
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
1406.0
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
1395.6
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
1385.6
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
1371.1
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
1349.4
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
1336.4
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
1314.0
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
1297.5
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
1270.2
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
1239.6
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
1069.2
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
1025.6
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
1017.2
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
1013.9
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
1010.5
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
967.9
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
934.6
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
927.8
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
912.8
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
865.9
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
846.2
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
724.2
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
712.0
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
698.6
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
549.3
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
517.4
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
415.9
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.