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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 90.1
Min pTPM: 4.8
Std pTPM: 12.6
Median pTPM: 26.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
90.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
53.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
53.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
52.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
50.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
48.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
46.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
45.3
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
44.2
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
44.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
41.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
41.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
40.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
39.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
38.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
38.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
38.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
38.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
37.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
37.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
36.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
36.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
35.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
35.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
34.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
34.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
34.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
33.6
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
33.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
32.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
32.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
31.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
31.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
31.2
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
30.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
30.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
30.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
30.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
29.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
29.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
29.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
29.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
28.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
27.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
27.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
27.3
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
26.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
26.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
26.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
26.1
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
26.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
26.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
26.0
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
26.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
25.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
24.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
24.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
24.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
23.5
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
23.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
22.9
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
22.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
22.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
22.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
22.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
22.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
22.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
21.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
21.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
21.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
20.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
20.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
20.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
19.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
19.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
19.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
18.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
18.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
17.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
17.3
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
17.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
16.7
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
15.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
15.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
15.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
15.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
14.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
14.3
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
13.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
13.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
12.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
11.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
11.5
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
11.1
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
10.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
10.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
9.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
9.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
7.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
4.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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