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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 190.4
Min pTPM: 2.3
Std pTPM: 36.6
Median pTPM: 45.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
190.4
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
180.6
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
142.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
117.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
110.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
106.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
105.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
102.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
101.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
101.4
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
100.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
99.1
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
94.9
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
93.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
93.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
91.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
89.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
89.0
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
86.5
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
82.7
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
82.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
78.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
70.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
70.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
70.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
70.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
69.4
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
67.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
66.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
66.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
65.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
65.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
64.3
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
63.5
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
62.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
61.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
60.9
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
60.4
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
58.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
56.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
54.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
53.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
51.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
48.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
48.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
48.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
48.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
48.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
46.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
45.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
45.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
45.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
45.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
45.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
43.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
41.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
41.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
38.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
38.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
37.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
36.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
36.6
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
36.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
35.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
35.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
33.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
31.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
31.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
30.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
29.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
28.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
26.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
25.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
25.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
24.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
22.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
19.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
18.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
18.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
18.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
17.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
16.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
16.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
15.1
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
13.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
13.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
13.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
12.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
12.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
11.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
10.6
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
9.8
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
8.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
7.5
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
7.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
6.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
6.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
6.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
3.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
2.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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