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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 163.2
Min pTPM: 10.3
Std pTPM: 33.9
Median pTPM: 61.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
163.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
156.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
139.5
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
138.4
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
137.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
117.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
116.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
116.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
113.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
112.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
108.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
107.5
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
106.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
102.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
101.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
99.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
99.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
99.4
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
98.8
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
97.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
97.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
95.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
95.0
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
92.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
92.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
92.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
90.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
90.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
90.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
90.0
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
85.2
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
84.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
84.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
82.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
82.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
82.2
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
77.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
75.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
72.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
72.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
70.8
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
70.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
69.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
68.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
68.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
67.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
66.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
64.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
63.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
62.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
60.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
59.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
59.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
58.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
56.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
55.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
53.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
53.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
51.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
50.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
50.1
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
49.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
49.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
49.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
49.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
48.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
48.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
47.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
47.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
46.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
46.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
45.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
45.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
41.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
40.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
40.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
35.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
35.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
35.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
33.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
32.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
31.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
31.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
29.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
29.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
28.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
27.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
27.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
24.6
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
24.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
23.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
23.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
21.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
21.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
21.2
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
19.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
17.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
16.1
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
14.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
10.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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