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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 441.0
Min pTPM: 12.0
Std pTPM: 94.3
Median pTPM: 121.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
441.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
439.6
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
419.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
371.4
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
338.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
309.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
286.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
282.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
269.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
265.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
259.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
243.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
232.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
229.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
213.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
212.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
211.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
208.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
206.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
205.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
203.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
202.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
202.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
199.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
196.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
196.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
181.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
176.1
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
174.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
171.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
165.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
163.8
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
161.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
159.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
159.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
156.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
152.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
152.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
146.7
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
144.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
139.1
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
137.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
137.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
133.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
132.0
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
130.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
129.6
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
125.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
125.4
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
121.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
121.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
121.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
120.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
111.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
110.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
107.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
106.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
105.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
102.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
99.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
99.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
97.6
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
97.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
95.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
93.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
93.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
85.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
81.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
69.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
67.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
66.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
66.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
66.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
64.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
64.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
58.9
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
58.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
57.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
54.5
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
51.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
47.4
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
45.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
43.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
42.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
39.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
37.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
35.1
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
34.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
34.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
31.2
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
28.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
28.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
28.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
27.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
26.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
26.3
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
25.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
23.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
19.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
12.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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