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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 870.1
Min pTPM: 16.6
Std pTPM: 144.8
Median pTPM: 106.0
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
870.1
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
706.9
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
507.3
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
448.0
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
399.5
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
392.2
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
373.3
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
358.4
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
348.7
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
317.7
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
307.8
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
295.6
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
291.3
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
254.8
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
242.7
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
235.4
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
228.0
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
221.3
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
208.5
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
204.1
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
183.6
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
182.3
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
179.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
177.4
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
167.4
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
165.0
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
161.0
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
160.5
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
159.8
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
158.8
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
156.4
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
152.0
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
142.4
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
141.8
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
139.8
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
137.1
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
134.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
133.3
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
123.6
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
120.7
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
120.4
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
115.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
112.9
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
107.3
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
104.8
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
103.8
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
101.9
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
101.4
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
99.9
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
90.5
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
89.2
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
86.6
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
85.5
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
84.1
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
79.9
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
79.5
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
79.5
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
78.4
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
71.0
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
66.9
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
62.2
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
61.3
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
60.4
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
58.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
53.7
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
52.9
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
52.3
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
50.8
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
48.5
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
48.1
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
44.9
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
43.2
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
43.0
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
42.0
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
40.7
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
38.6
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
37.4
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
36.5
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
36.3
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
34.7
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
34.1
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
33.7
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
32.9
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
29.1
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
29.1
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
26.7
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
18.4
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
16.6
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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