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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 883.2
Min pTPM: 0.8
Std pTPM: 128.4
Median pTPM: 26.2
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
883.2
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
586.2
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
504.3
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
283.0
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
277.2
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
228.5
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
194.9
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
173.8
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
148.5
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
131.1
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
123.5
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
119.8
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
112.3
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
101.6
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
93.6
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
82.8
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
72.2
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
63.9
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
63.7
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
60.7
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
52.4
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
52.1
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
51.0
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
48.4
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
45.8
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
45.7
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
45.4
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
45.0
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
44.1
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
40.6
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
39.4
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
36.5
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
36.2
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
34.8
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
33.9
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
33.6
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
33.5
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
30.5
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
29.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
28.8
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
27.9
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
27.7
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
27.3
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
27.1
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
25.3
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
24.6
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
24.6
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
22.7
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
22.5
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
22.2
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
20.9
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
19.7
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
19.5
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
18.9
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
17.6
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
16.9
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
16.5
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
15.7
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
15.1
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
15.0
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
14.7
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
14.3
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
13.8
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
12.7
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
12.5
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
11.8
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
11.6
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
11.5
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
11.1
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
8.9
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
8.5
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
8.5
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
7.6
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
7.0
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
5.7
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
4.8
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
4.2
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
4.2
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
4.1
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
4.0
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
3.3
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
2.7
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
1.7
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
1.7
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
1.7
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
1.5
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
1.1
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
0.8
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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