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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 73.5
Min pTPM: 12.4
Std pTPM: 15.2
Median pTPM: 35.2
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
73.5
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
71.9
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
70.9
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
69.9
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
69.3
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
66.5
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
64.1
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
63.3
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
62.7
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
61.6
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
60.3
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
60.3
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
59.9
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
58.5
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
58.1
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
56.8
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
56.7
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
56.0
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
55.2
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
55.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
52.1
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
51.2
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
50.9
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
50.8
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
50.5
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
50.1
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
49.0
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
48.3
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
47.3
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
47.1
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
46.7
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
46.6
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
45.5
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
44.6
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
44.6
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
44.3
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
44.2
GTEX-15CHQ-0011-R1a-SM-6EU31
60-69 years, male
43.3
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
43.2
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
43.1
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
42.9
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
42.3
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
42.3
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
42.2
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
41.7
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
41.2
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
41.1
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
40.5
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
40.0
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
38.9
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
38.7
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
38.5
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
38.3
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
38.3
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
37.8
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
37.8
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
37.3
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
37.0
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
36.7
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
36.6
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
36.2
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
35.2
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
34.6
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
34.5
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
34.0
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
33.5
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
33.2
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
32.1
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
32.1
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
32.0
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
31.9
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
31.8
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
31.3
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
30.9
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
30.5
GTEX-14PJM-0011-R1a-SM-6EU2Z
50-59 years, female
30.5
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
30.4
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
30.3
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
30.1
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
30.0
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
29.4
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
29.3
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
29.2
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
29.1
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
28.6
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
27.9
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
27.8
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
27.4
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
27.3
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
27.0
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
26.6
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
26.4
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
25.1
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
24.4
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
24.3
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
23.5
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
23.3
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
22.9
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
22.6
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
22.5
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
21.8
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
21.7
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
21.5
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
21.2
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
21.2
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
19.1
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
18.4
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
17.5
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
17.5
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
16.9
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
16.8
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
16.8
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
16.8
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
16.5
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
15.8
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
15.3
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
14.7
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
14.6
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
14.5
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
14.5
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
14.0
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
12.8
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
12.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.