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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 2114.4
Min pTPM: 67.6
Std pTPM: 368.4
Median pTPM: 278.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
2114.4
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
1938.1
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
1393.8
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
1360.9
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
1277.5
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
1146.6
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
964.7
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
863.3
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
859.5
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
854.9
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
762.9
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
698.6
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
674.8
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
627.6
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
620.1
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
616.9
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
594.9
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
594.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
561.8
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
536.8
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
508.7
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
490.1
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
478.6
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
468.6
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
459.6
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
456.3
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
454.6
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
440.1
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
418.4
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
409.4
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
404.4
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
400.6
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
376.8
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
376.5
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
374.9
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
367.5
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
360.5
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
344.8
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
344.3
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
310.0
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
308.7
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
281.0
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
279.6
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
278.8
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
278.4
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
275.3
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
268.4
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
266.9
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
265.0
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
260.3
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
259.3
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
257.7
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
257.6
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
255.7
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
252.1
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
250.7
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
248.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
248.3
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
243.6
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
237.1
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
236.9
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
235.8
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
224.8
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
224.5
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
224.0
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
220.5
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
218.8
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
215.5
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
214.4
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
212.4
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
209.2
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
200.7
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
198.6
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
198.0
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
179.1
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
169.1
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
166.8
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
163.4
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
157.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
142.8
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
133.8
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
131.0
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
122.6
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
108.1
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
100.4
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
96.0
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
91.0
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
67.6
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.