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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 143.7
Min pTPM: 2.2
Std pTPM: 33.0
Median pTPM: 29.4
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
143.7
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
122.6
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
114.3
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
113.9
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
109.1
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
107.7
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
102.9
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
102.7
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
99.3
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
99.3
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
97.9
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
97.4
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
96.6
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
92.9
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
91.7
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
84.9
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
84.7
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
82.3
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
80.6
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
77.0
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
73.9
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
73.7
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
73.1
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
72.9
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
72.0
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
70.9
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
70.2
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
66.4
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
61.1
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
59.4
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
58.1
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
58.0
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
56.8
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
54.6
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
54.1
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
53.3
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
52.4
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
51.8
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
51.7
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
51.0
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
50.7
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
50.7
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
49.6
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
49.5
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
48.0
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
47.9
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
47.9
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
47.7
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
45.8
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
43.7
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
40.5
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
40.3
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
40.2
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
39.6
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
38.8
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
36.8
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
36.0
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
35.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
33.9
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
30.6
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
30.1
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
29.4
GTEX-15CHQ-0011-R1a-SM-6EU31
60-69 years, male
29.2
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
29.1
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
29.0
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
28.5
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
27.2
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
26.7
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
25.7
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
24.7
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
24.3
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
24.0
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
24.0
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
23.6
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
23.4
GTEX-14PJM-0011-R1a-SM-6EU2Z
50-59 years, female
23.3
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
21.8
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
20.3
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
19.4
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
17.9
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
17.7
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
16.9
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
16.8
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
16.5
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
15.0
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
14.9
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
14.8
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
14.6
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
14.5
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
13.8
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
13.6
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
13.3
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
12.2
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
12.1
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
12.0
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
11.0
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
10.6
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
9.4
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
9.3
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
8.9
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
8.6
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
8.3
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
8.0
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
7.9
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
7.8
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
7.7
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
7.6
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
7.5
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
7.4
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
7.3
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
7.3
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
7.3
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
7.1
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
7.1
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
5.9
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
5.5
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
5.3
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
4.6
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
4.5
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
3.4
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
3.0
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
2.8
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
2.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.