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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 156.4
Min pTPM: 7.3
Std pTPM: 28.5
Median pTPM: 40.4
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
156.4
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
118.4
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
117.2
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
113.6
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
98.4
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
98.3
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
97.9
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
96.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
96.2
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
94.9
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
91.4
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
90.3
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
90.3
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
88.1
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
85.3
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
84.4
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
81.7
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
81.0
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
79.5
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
79.2
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
75.7
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
72.4
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
72.0
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
68.5
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
67.4
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
66.9
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
66.8
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
64.8
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
64.8
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
63.0
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
62.4
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
61.9
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
60.6
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
60.4
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
60.4
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
59.9
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
57.8
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
57.7
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
56.7
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
56.0
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
55.4
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
54.9
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
54.0
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
53.6
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
52.8
GTEX-15CHQ-0011-R1a-SM-6EU31
60-69 years, male
52.3
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
52.1
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
51.8
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
51.7
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
51.5
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
50.9
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
50.7
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
49.0
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
48.9
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
45.7
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
45.2
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
44.4
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
42.8
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
42.5
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
42.0
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
40.5
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
40.4
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
39.2
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
39.1
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
39.1
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
38.8
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
38.7
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
38.2
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
38.1
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
38.0
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
37.5
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
36.0
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
35.0
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
35.0
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
34.9
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
34.8
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
34.1
GTEX-14PJM-0011-R1a-SM-6EU2Z
50-59 years, female
33.4
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
32.9
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
32.9
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
31.7
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
30.4
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
29.2
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
28.8
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
27.0
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
26.7
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
26.3
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
25.5
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
25.0
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
24.3
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
23.7
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
23.5
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
23.2
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
22.7
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
22.6
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
22.0
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
20.9
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
20.9
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
20.6
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
20.4
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
19.7
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
19.1
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
18.0
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
17.2
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
16.6
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
16.3
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
15.7
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
15.5
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
15.4
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
15.3
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
14.5
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
14.5
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
14.5
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
14.4
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
13.6
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
13.4
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
12.3
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
12.3
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
11.9
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
11.8
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
10.6
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
7.7
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
7.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.