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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 76.6
Min pTPM: 4.8
Std pTPM: 16.2
Median pTPM: 34.2
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
76.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
75.0
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
74.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
71.8
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
70.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
64.0
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
62.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
61.7
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
59.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
58.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
58.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
57.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
57.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
55.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
55.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
54.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
53.1
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
53.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
52.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
51.3
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
50.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
50.7
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
48.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
48.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
48.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
46.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
45.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
44.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
44.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
43.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
43.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
42.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
41.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
41.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
41.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
40.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
40.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
40.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
40.0
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
39.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
39.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
39.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
38.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
37.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
36.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
36.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
35.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
35.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
35.0
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
34.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
34.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
33.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
32.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
31.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
30.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
30.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
30.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
29.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
29.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
29.0
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
29.0
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
27.5
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
27.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
26.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
26.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
26.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
26.6
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
26.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
25.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
25.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
24.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
24.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
24.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
24.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
24.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
23.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
23.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
22.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
22.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
22.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
22.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
21.6
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
21.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
21.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
21.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
20.3
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
19.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
19.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
18.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
17.5
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
16.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
16.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
16.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
15.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
12.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
11.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
11.0
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
9.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
9.3
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
4.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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