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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 169.8
Min pTPM: 5.3
Std pTPM: 29.3
Median pTPM: 67.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
169.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
149.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
127.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
124.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
118.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
117.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
112.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
112.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
110.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
106.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
104.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
103.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
103.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
101.8
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
101.6
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
99.4
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
94.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
92.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
90.8
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
88.1
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
87.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
84.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
84.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
83.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
82.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
82.6
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
81.0
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
80.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
77.7
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
77.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
77.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
77.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
76.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
76.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
75.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
75.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
74.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
73.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
72.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
72.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
72.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
72.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
70.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
70.9
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
70.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
69.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
68.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
68.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
67.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
67.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
67.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
66.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
66.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
66.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
63.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
62.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
61.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
60.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
59.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
59.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
59.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
58.7
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
56.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
54.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
54.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
52.3
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
51.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
50.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
49.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
49.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
49.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
48.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
48.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
47.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
46.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
46.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
46.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
45.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
45.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
45.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
42.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
41.4
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
41.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
39.2
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
39.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
37.3
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
37.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
36.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
35.1
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
34.5
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
31.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
30.1
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
27.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
26.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
22.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
20.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
17.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
15.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
15.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
5.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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