We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 240.8
Min pTPM: 2.0
Std pTPM: 46.8
Median pTPM: 49.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
240.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
203.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
180.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
175.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
173.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
152.3
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
151.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
140.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
140.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
136.4
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
131.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
116.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
101.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
100.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
95.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
94.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
91.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
91.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
87.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
86.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
84.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
84.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
80.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
80.7
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
76.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
76.6
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
76.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
75.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
74.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
74.4
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
72.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
72.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
72.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
70.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
70.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
70.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
69.9
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
67.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
67.1
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
67.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
65.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
62.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
57.8
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
57.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
55.7
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
54.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
53.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
53.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
51.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
50.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
48.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
48.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
45.8
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
45.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
45.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
43.1
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
41.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
41.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
40.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
40.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
38.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
37.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
35.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
35.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
34.6
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
33.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
33.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
32.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
31.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
31.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
29.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
29.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
27.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
26.8
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
26.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
26.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
25.2
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
25.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
23.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
22.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
21.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
20.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
19.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
17.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
16.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
16.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
15.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
14.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
13.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
12.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
12.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
10.1
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
8.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
8.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
8.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
8.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
8.0
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
8.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
4.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
2.0
Show allShow less
AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
MENU
