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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 467.3
Min pTPM: 47.9
Std pTPM: 85.7
Median pTPM: 129.1
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
467.3
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
414.7
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
379.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
376.2
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
365.7
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
326.2
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
314.3
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
305.9
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
301.9
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
276.7
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
264.1
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
259.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
250.7
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
246.8
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
233.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
215.6
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
211.0
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
204.7
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
198.6
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
195.8
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
193.1
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
189.3
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
189.1
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
181.7
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
181.4
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
172.2
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
167.2
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
165.0
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
164.9
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
152.6
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
149.0
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
148.5
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
146.4
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
146.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
145.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
144.8
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
144.1
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
143.5
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
138.2
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
135.1
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
134.6
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
134.3
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
131.0
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
130.2
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
128.1
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
125.0
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
124.9
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
123.3
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
123.2
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
122.3
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
120.3
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
117.8
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
116.7
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
115.6
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
113.9
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
113.5
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
112.7
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
112.6
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
112.4
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
110.6
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
109.7
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
108.5
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
108.3
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
108.2
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
107.9
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
106.4
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
103.5
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
103.3
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
101.7
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
100.5
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
99.9
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
98.8
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
94.7
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
93.5
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
93.3
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
92.2
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
89.8
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
86.4
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
85.6
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
84.2
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
81.4
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
79.2
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
60.0
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
59.1
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
57.9
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
55.0
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
53.5
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
47.9
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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